Gene Information

Name : CC1_28050 (CC1_28050)
Accession : YP_007770822.1
Strain : Coprococcus catus GD/7
Genome accession: NC_021009
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2844380 - 2846974 bp
Length : 2595 bp
Strand : +
Note : -

DNA sequence :
ATGGATTTAAATAAATTTACACAGAAGTCCCTGCAGGCAGTGCAGGATTGTCAGAAACTGGCTTATCAGTACGGGAATCA
GAAGATTGAACAGGAACATCTGCTTCTGAGCCTGCTGACCCAGGAAGACAGCCTGATCGACAGACTGCTGGCGAAGATGG
GAATTAATCATGAAGGATTTAAGGTACAGGCGACGAAGCTTGTTGAGAAGCTTGTCAAGGTATCCGGCGGCCAGGTTTAT
GTAGGTGATAACCTGAACCGTACACTGGTACGGGCTGAGGAAGAAGCGAAGCAGATGGATGATGAATATATCTCTGTTGA
GCACCTTTTCCTGGCATTGTTTGAGACAGCCGACAGTGATATCAAGACATTATTCAGGAATTTTGAAGTAACAAGAGATG
GTTTCCTTCAGGCACTTTCCACTGTCCGAGGCAATCAGCGTGTGACAAGTGATAACCCTGAGGCAACTTATGACAGCCTG
AGTAAGTATGCAGAAGATTTGGTAGGCAAGGCAAGAGCCCAGAAGATGGATCCTGTCATTGGCCGTGATACGGAGATCCG
TAACATTATCCGTATCCTTTCTCGTAAGACGAAGAACAACCCGGTACTGATCGGTGAGCCTGGTGTAGGTAAGACCGCAG
TTATCGAGGGCCTGGCACAGCGTATCGTCAAGGGCGATGTGCCGGATGGCCTGAAGGACAAGAAGATTTATTCTCTGGAT
ATGGGCGCACTGGTAGCCGGTGCCAAGTACAGAGGTGAATTCGAGGAACGTCTGAAGGCTGTTCTTGCTGAGGTCAAGAA
GAGCGACGGCGAGATTATTCTTTTCATCGATGAGCTGCATCTGATCGTTGGTGCCGGCAAGACGGACGGTGCCATGGATG
CCAGCAATATGCTGAAGCCTATGCTGGCCAGAGGTGAACTCCACTGTATCGGTGCGACAACACTGGACGAGTACAGACAA
TACATTGAGAAGGATAAGGCGCTTGAGCGTCGTTTCCAGCCGGTTATGGTGGATGAGCCGACGGTGGAGGATACCATTGC
CATTCTTCGTGGCCTGAAAGAAAGATATGAAGTTTTCCATGGCGTTAAGATTACAGATGGTGCCCTTGTGGCAGCTGCAA
CGCTTTCACATAGATACATTACCGATCGTTTCCTTCCGGATAAGGCGATTGACCTTGTGGATGAAGCCTGTGCAATGATC
AAGACAGAACTTGATTCTATGCCGACAGAATTGGATGAGATTTCGCGTAAGATCATGCAGTTGGAGATTGAGGAAGCTGC
TCTGAAGAAAGAGGACGACAAGCTCAGTCAGGAACGGTTGCAGAACATTACCCATGAGATTGCCGAACTGAGAGAAGATT
TCAAGGTTCAGAAGGCTAAATGGGACGATGAGAAGCAGGATGTTGAGAAGCTGCAGAGCCTGCGTGAACAGATTGAAGAC
CTGAACAAGCAGATTGAGTTGGCTCAGAGGAATTATGATCTGAACAAGGCTGCTGAACTTCAGTACGGCAAGCTGCCTCA
GCTGAAGAAACAGCTGGAAGAGGAAGAGGCGCGTGTCCATGGAGAAGAGAATTCTATTCTTCGTGAACGTGTCACTGATG
AAGAGATTGCCAGAATCGTGTCCAGATGGACAGGTATTCCGGTTGCAAAGCTGACAGAGAGCGAGCGTAATAAGATCCTT
CATCTGGACGATGAACTTCACAAACGTGTCATCGGTCAGGAAGAAGGTGTATCGAAAGTCACAGAAGCGATTATCCGTTC
CAAGGCAGGTATCCAGGATGAGAACAGACCGATTGGTTCGTTCCTGTTCCTTGGCCCTACTGGTGTTGGTAAGACAGAAC
TTGCCAAGGCACTGGCAGAGAATCTGTTTGATGATGAGAACAATATGGTGCGTATCGATATGAGTGAATACATGGAGAAG
TTCTCCGTGTCCAGACTGATCGGAGCGCCTCCGGGATATGTTGGTTATGAAGAAGGCGGACAGCTGACAGAAGCAGTCAG
AAGAAAACCTTACTCTGTTATCCTTTTCGATGAGATTGAGAAGGCCCATCCGGATGTTTTCAATGTATTGCTGCAGATTC
TGGATGATGGTCGTGTGACCGATTCTCAGGGCAGAACGGTAGACTTTAAGAATACGATTCTGATCATGACGTCAAACATT
GGTTCTTCCTATCTGCTGGAGGGCATTGACAGCGAAGGCAATATCAGTGATGAAGCAAGACAGAACACGATGAATGATCT
GAAAGCACATTTCAGACCGGAATTTCTGAACCGTCTTGATGAGATCATTATGTTCAAGCCGTTAACGAAGGACAACATCA
GCGGTATCATTGATATCCTGATCGGTCGTCTGAATAAGCGTCTTGAGACAAAGGAACTGACACTTCAGCTGACACCGGCT
GCAAAGGATTACATCACAGATCATGGTTATGATCCGGTTTATGGTGCACGTCCGTTGAAGCGGTATATCCAGAAGAATGT
CGAGACCATGGTAGCCAAAATGATCCTTGGCAATGAATTGGAGCCGGGCGACTGCATCAATGTAGATGCTGATGCCAATG
GCCTCACAACAACCACAACACATATTGAAGACTAA

Protein sequence :
MDLNKFTQKSLQAVQDCQKLAYQYGNQKIEQEHLLLSLLTQEDSLIDRLLAKMGINHEGFKVQATKLVEKLVKVSGGQVY
VGDNLNRTLVRAEEEAKQMDDEYISVEHLFLALFETADSDIKTLFRNFEVTRDGFLQALSTVRGNQRVTSDNPEATYDSL
SKYAEDLVGKARAQKMDPVIGRDTEIRNIIRILSRKTKNNPVLIGEPGVGKTAVIEGLAQRIVKGDVPDGLKDKKIYSLD
MGALVAGAKYRGEFEERLKAVLAEVKKSDGEIILFIDELHLIVGAGKTDGAMDASNMLKPMLARGELHCIGATTLDEYRQ
YIEKDKALERRFQPVMVDEPTVEDTIAILRGLKERYEVFHGVKITDGALVAAATLSHRYITDRFLPDKAIDLVDEACAMI
KTELDSMPTELDEISRKIMQLEIEEAALKKEDDKLSQERLQNITHEIAELREDFKVQKAKWDDEKQDVEKLQSLREQIED
LNKQIELAQRNYDLNKAAELQYGKLPQLKKQLEEEEARVHGEENSILRERVTDEEIARIVSRWTGIPVAKLTESERNKIL
HLDDELHKRVIGQEEGVSKVTEAIIRSKAGIQDENRPIGSFLFLGPTGVGKTELAKALAENLFDDENNMVRIDMSEYMEK
FSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNVLLQILDDGRVTDSQGRTVDFKNTILIMTSNI
GSSYLLEGIDSEGNISDEARQNTMNDLKAHFRPEFLNRLDEIIMFKPLTKDNISGIIDILIGRLNKRLETKELTLQLTPA
AKDYITDHGYDPVYGARPLKRYIQKNVETMVAKMILGNELEPGDCINVDADANGLTTTTTHIED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-106 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CC1_28050 YP_007770822.1 ATP-dependent chaperone ClpB VFG0079 Protein 0.0 47
CC1_28050 YP_007770822.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-118 44