|
Name : CC1_26620 (CC1_26620) Accession : YP_007770703.1 Strain : Coprococcus catus GD/7 Genome accession: NC_021009 Putative virulence/resistance : Unknown Product : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Function : - COG functional category : - COG ID : - EC number : - Position : 2692353 - 2693054 bp Length : 702 bp Strand : + Note : - DNA sequence : ATGAATAAGCCGCTTGTTCTTGTTGTAGAAGATGATACCCCGGTGCGCAATTTAATCACGACGACGCTGAAAACTCACGA ATACAGATATCTCTCGGCTCAAAACGGCGCAAGCGCCGTGCTGGAGGCACTGTCGCATAATCCGGATATTGTGCTGCTCG ATCTGGGACTCCCGGATATGGACGGTGTGGAGATCATCCGAAAAATCCGTTCGTGGTCGAATATGCCGATTATTGTGATC AGCGCCAGAACGGAGGATTCTGATAAAATCGGGGCACTGGATGCCGGGGCAGACGATTACCTGACGAAACCTTTTTCTGT GGATGAGCTACTGGCGCGGCTACGGGTGACGCAGCGAAGATTAGCGTTGATGAAAGCGGATACGGCGCAGGAAACTCCGA TTTTTACGAATGGTGCGCTGAAAATCGACTATGCGGCAGGCTGCGCATATATTGATGGTGCAGAACTGCACTTGACGCCC ATCGAATACAAGCTGCTGTGCCTGCTCTCAAAAAATGTGGGTAAGGTTCTGACACACACCTACATTACGCAGCAGATTTG GGGCAGCAGTTGGGAAAATGATATTGCTTCTCTGCGAGTATTCATGGCAACCCTGCGCAAAAAGCTGGAAAACGGGAAAG ATGGGCAGCAATACATACAAACGCACATCGGCATCGGTTATCGGATGCTTCGGGTTGAGTGA Protein sequence : MNKPLVLVVEDDTPVRNLITTTLKTHEYRYLSAQNGASAVLEALSHNPDIVLLDLGLPDMDGVEIIRKIRSWSNMPIIVI SARTEDSDKIGALDAGADDYLTKPFSVDELLARLRVTQRRLALMKADTAQETPIFTNGALKIDYAAGCAYIDGAELHLTP IEYKLLCLLSKNVGKVLTHTYITQQIWGSSWENDIASLRVFMATLRKKLENGKDGQQYIQTHIGIGYRMLRVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 6e-42 | 45 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 4e-41 | 44 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 3e-41 | 44 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 4e-41 | 44 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 4e-41 | 44 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 4e-41 | 44 |
