Gene Information

Name : CC1_02620 (CC1_02620)
Accession : YP_007768620.1
Strain : Coprococcus catus GD/7
Genome accession: NC_021009
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 269396 - 270070 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence :

ATGAGTGTGATATTAGAAACCAAGCAGCTTTGTAAGTTTTATGGCGCAGGTGAGAATCAGGTCAAAGCGGTCAATCAGGT
GGACATTCAGATTGAGCGGGGAGAATTTGTCGCAATTGTTGGAAAGTCAGGTTCCGGTAAAAGTACATTACTTCATATGC
TTGGAGGGCTAGACACCCCGACAAAAGGCAGAGTTACTTTAGCGGGGAAAGATTTATACAGGATGAAGGAAGATGCCCTT
GCTGTTTTCCGCAGAAGAAAAATCGGATTTGTTTTTCAGGCATTTAATCTGGTTTCATCTGTTAATGTCTGGGAAAATAT
TGTACTGCCACTGGGGCTGGACGGAAGAAAAGTGGATGAAGCGTATGTAAATGATATTATTGCAACTCTGGGGATTGAAA
ACCGGATTTGTAATCTGCCAAATCAGTTATCCGGAGGACAGCAGCAGAGAGTAGCAATTGCAAGAGCACTGGTGAATCGT
CCGGAAATTATATTTGCAGATGAGCCGACAGGCAATCTTGATTCCAAGACCAGTGATGAGGTAATTGCTCTGCTTAAGAT
GACAGCAAAAAAATATGGACAGACAATTGTAATGATTACCCATGATGATGAGATCGCGCAGGTTGCTGACCGTATTTTAG
TCATCGAGGATGGACAGGTGGTGGATTTCAATTGA

Protein sequence :

MSVILETKQLCKFYGAGENQVKAVNQVDIQIERGEFVAIVGKSGSGKSTLLHMLGGLDTPTKGRVTLAGKDLYRMKEDAL
AVFRRRKIGFVFQAFNLVSSVNVWENIVLPLGLDGRKVDEAYVNDIIATLGIENRICNLPNQLSGGQQQRVAIARALVNR
PEIIFADEPTGNLDSKTSDEVIALLKMTAKKYGQTIVMITHDDEIAQVADRILVIEDGQVVDFN

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	2e-37	46
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	4e-39	46
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	4e-39	46
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	4e-39	46

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CC1_02620	YP_007768620.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	8e-68	63
CC1_02620	YP_007768620.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	2e-59	55
CC1_02620	YP_007768620.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	3e-40	46
CC1_02620	YP_007768620.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_008702.1.4606598.	Protein	5e-34	46