Gene Information

Name : CC1_15960 (CC1_15960)
Accession : YP_007769770.1
Strain : Coprococcus catus GD/7
Genome accession: NC_021009
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1648413 - 1649117 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence :
ATGTCGGAATTTGTAGTCATGGAGAATGTGAAGAAGACTTACAAAATGGGTGAAGTGATGATTCATGCCGTGGATGGCGT
TGATATGGAGATACATAAAGGCGAATTTGCAGTGATCGTGGGACCGAGTGGTGCCGGTAAAACGACGGTACTTAATATGC
TGGGCGGTATGGACAGCGTGACATCAGGCAAGGTCATTGTAGACGGACGGGATATCAGCCGTTATAGCAGCAGACAGCTG
ACAAAGTACCGCCGGGACGACATTGGTTTTGTTTTCCAGTTTTATAATCTGATCCAGAATCTGAACGCTCTGGAGAATGT
GGAACTGGCATTGCAGATCAGCAAGCATCCCCTGGATGCGAAAGAGGTTTTGAAGGATGTGGGTCTGGAAGACCGTATGT
ATAATTTTCCATCACAGCTCTCGGGGGGTGAACAGCAAAGGGTAGCGATCGCACGTGCTCTTGCCAAGAATCCGAAGCTG
CTCTTATGTGATGAACCCACCGGTGCTTTGGATTATCAGACCGGTAAGGCAATTTTGAAATTGCTGCAGGATACCTGCCA
TAAGCATGGCATGACGGTGATCGTTATTACTCATAACCTGGCCATTGCGCCGATGGCGGACAGGGTGATCCAGATTAAGA
ACGGAAGGGTCAGTGAGATGACGGTGAATCCAGATCCGCGTCCGGTAGAGACCATTGAATGGTAG

Protein sequence :
MSEFVVMENVKKTYKMGEVMIHAVDGVDMEIHKGEFAVIVGPSGAGKTTVLNMLGGMDSVTSGKVIVDGRDISRYSSRQL
TKYRRDDIGFVFQFYNLIQNLNALENVELALQISKHPLDAKEVLKDVGLEDRMYNFPSQLSGGEQQRVAIARALAKNPKL
LLCDEPTGALDYQTGKAILKLLQDTCHKHGMTVIVITHNLAIAPMADRVIQIKNGRVSEMTVNPDPRPVETIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-36 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CC1_15960 YP_007769770.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 4e-59 57
CC1_15960 YP_007769770.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 4e-39 46
CC1_15960 YP_007769770.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 7e-40 45
CC1_15960 YP_007769770.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 6e-35 41