Gene Information

Name : BIL_10380 (BIL_10380)
Accession : YP_007767561.1
Strain : Bifidobacterium longum F8
Genome accession: NC_021008
Putative virulence/resistance : Unknown
Product : Integrase core domain.
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1209731 - 1211041 bp
Length : 1311 bp
Strand : -
Note : -

DNA sequence :
ATGGAAGACGGGATCAGCATGGCGACGAAGCGGCAGATCACCCTGAGATTCAGGGATGAGTACATGAAGGCATCGAAGAA
GGACAAGGGACGCATCCTCGACGAGATGTGCTCCGTGTTGGCAATCGGCAGGAGCACCGCAAGACGCAGGCTCGCGGAAG
CCGGACGCGGCAGGCCGTCGCCGCCGCCCGAGGAGCGGCTGAAGCGGTATTCAGAGCAGTCGCGCGACCTGCTGGTGCGG
GTGTGGCTGATGATGGATCTGCCGTGCGCGAAGTATTTGAAGGCGATGCTGCCGACGTGGCTGCCGATGCTGCGCGCGCA
TGGCGAGCTCGCCGACTATGACGGGTTCGCGTTCCTGGAGCTGGAGAGGATGAGCTCGGCCACGATGGACCGGTACCTCG
AAAAGACGCGGGACGCCGCCAGGCCCAGGGGAACCGTGCCGACCCGGCCCGCGGGCGAGCTGCTGCGCAACTCCATCGCG
ATCAGGAAGGCCGGCGACGAATTGGACGGCCTGCCCGGCAACGTCGAGGCCGACACCGTCGCCCACTGCGGTCCGAGCGC
CAGAGGCGAGTTCTGCCGCACCCTGACCGTCGTCGACATCGCGACCGGATGGACCGAGAACGCCTCCTGTCGCAACAACG
CGTTCGTGAACTTCTCCAAGGCCGAGGAGACGATCGAGGGGCGGATGCCGTTCCGCATCCGCCCCTACGACACGGACAAC
GGCAGCGAATTCATCAACCGGGACCTGATCGCATGGCTACAGGAGCGCGACATCGAGCAGACCCGCTCCCGCCCCTACAG
GAAGAACGACCAGGCCACCGTCGAATCCAGGAACAACCACATCGTGCGCCGTCACGCGTTCCACTACCGGTACACGGTCG
ACGAGCTCGGCCTTCTCAACGAGCTATGGGAGTTGGTGCGCATCAAGGCCAACCTGTTCACCCCGTCCAAGAAGCCCGTC
GGCCGGGCCTGCACCCGCGACGGGCGGCCGCGGCGCGTCTACGACGAGCCGCGCACCCCGTGGGAGAGGCTCAAGGAGTT
CGACGAGAAGGACCGGGCCGCGGGAGGACCGGGATTCATCCTGCCCGGCAAACGCGAGGAGATCGAACGGATCATCGCCA
CGACGAACCCCGCGGAGCTCGTCCGGCGCATCCACGCCATACAGGACCGACTCGAAGCCCTGGCCGCGCCACGCACTGCA
CAGCTCGCCAGACGCGCCGGCCCGGACATGGCATACTTGAACAAGACGCTCGCCCGGATCGCGGGCGTCGAACCGGAAGA
CGACGAAACCCGGCAGGCCGACGAGGACTAG

Protein sequence :
MEDGISMATKRQITLRFRDEYMKASKKDKGRILDEMCSVLAIGRSTARRRLAEAGRGRPSPPPEERLKRYSEQSRDLLVR
VWLMMDLPCAKYLKAMLPTWLPMLRAHGELADYDGFAFLELERMSSATMDRYLEKTRDAARPRGTVPTRPAGELLRNSIA
IRKAGDELDGLPGNVEADTVAHCGPSARGEFCRTLTVVDIATGWTENASCRNNAFVNFSKAEETIEGRMPFRIRPYDTDN
GSEFINRDLIAWLQERDIEQTRSRPYRKNDQATVESRNNHIVRRHAFHYRYTVDELGLLNELWELVRIKANLFTPSKKPV
GRACTRDGRPRRVYDEPRTPWERLKEFDEKDRAAGGPGFILPGKREEIERIIATTNPAELVRRIHAIQDRLEALAAPRTA
QLARRAGPDMAYLNKTLARIAGVEPEDDETRQADED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0909 YP_005160001.1 integrase catalytic subunit Not tested Not named Protein 1e-55 45
CDBH8_0921 YP_005160013.1 integrase catalytic subunit Not tested Not named Protein 1e-59 43