Gene Information

Name : BIL_05590 (BIL_05590)
Accession : YP_007767177.1
Strain : Bifidobacterium longum F8
Genome accession: NC_021008
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 647746 - 650430 bp
Length : 2685 bp
Strand : -
Note : -

DNA sequence :
ATGGAGGAATACGATATGGAACAGAAGTTCACCACTATGGCCCAGGAGGCCGTCGGCGACGCGATTCAGAGTGCGTCCGC
CGCAGGAAACGCGCAGGTCGAGACCCTGCACGTCATGGATGCGCTGCTGCGCCAGGAAAACGGCGTGGCGCGCTCTCTGA
TCGAGGCCGCGGGCGGGGACCCGCAGGCCATCGGCGCGGCGGTGCGCAACGCTTTGGTCGCGCTGCCGAGCGCATCCGGA
TCCAGCACCTCGCAGCCACAGGCCAGCCGCCAGCTGACCGCCGCCATCGCCCAGGCTGAGAAGGAAATGCAGCAGATGGG
CGACGAATACGTCTCCACCGAACATCTGCTTATCGGCATCGCGGCCAGCAAGCCGAACCAGTCGGCCGAAATCTTGGAGA
AGAACGGCGTCACCGCAGCCTCCCTGCGCAAGGCCGTACCCGGCGTGCGTGGTGGCGCGAAGGTCACCAGCCCGGACGCG
GAAGGCTCGTACAAGGCCCTAGAGAAGTACTCCACCGACCTGACGGCCGCCGCCAAGGAAGGCAAGCTGGACCCGGTCAT
CGGACGTGACCAGGAAATCCGCCGCGTGATTCAGATCCTCTCCCGTCGTACCAAGAACAACCCGGTGCTGATCGGCGAGC
CCGGCGTCGGCAAGACCGCCGTCGTGGAAGGCCTGGCCCAGCGTATCGTGGCGGGCGACGTGCCTACCACCCTGCAAGGC
AAGAAGCTCATCTCCCTTGACCTAGGCTCCATGGTGGCCGGTTCGAAGTACCGTGGCGAGTTCGAGGAGCGCCTGAAGAG
CGTCCTGAACGAAATCAAGAATGCGGATGGTCAGATCATCACCTTCATCGACGAGATCCACACCATCGTCGGCGCGGGTG
CGGCCGAAGGCTCGATGGACGCCGGCAATATGTTGAAGCCCATGCTGGCCCGTGGCGAGCTGCGCCTGATCGGCGCGACC
ACGCTGGACGAGTACCGCGAGAACATCGAGAAGGACCCGGCGCTGGAGCGTCGTTTCCAGCAGGTGTTCGTGGGCGAGCC
GAGCGTGGAAGACACCATCGCCATCCTGCGTGGCCTGAAGCAGCGTTACGAGGCGCACCACAAGGTGACGATCGGCGACG
ACGCGCTGGTCGCCGCCGCGACCCTCTCGAACCGGTACATTTCGGGTCGTCAGCTGCCGGACAAGGCCATCGACCTGGTC
GATGAGGCGGCCGCTCACCTGCGTATGGAGCTCGACTCTTCGCCTGAGGAGATCGATGAGCTGCAGCGCAAGGTGACCCG
TCTTGAAATGGAGGAAATGCAGCTCAAGAAGGCCGAGGATCCTGCGTCCAAGGAGCGTCTGGGCAAGCTGCAAGCCGAAC
TTGCGGACACCCGTGAGAAGCTCAGCGGTCTCAAGGCGCGTTGGGATGCGGAACAGGCCGGCCACAACAAGGTCGGCGAC
CTGCGTGCCAAGCTCGACGACCTGCGCGTGCAGGCGGATAAGTATACCCGTGAAGGCAACTTGGCGGAGGCCTCGAAGAT
TCTGTACGGCGAGATTCCGTCCATTCAGAAGGAGCTTGCCGCCGCGGAGAGCGCGGATGCTGAATCTGCTGATGCCAGCG
CGGCCAACCCGGCCGATGAGCCGATGGTCCCGGACCGTGTGGACGCCGACTCGGTGGCTGAGATCGTCTCCGACTGGACC
GGCATTCCCGTCGGCCGCCTGATGCAGGGCGAAAACGAGAAGCTGCTGCACATGGAGGACTACCTCGGCAAGCGTGTGAT
CGGCCAGAAGGAAGCCATCGCCGCCGTGTCCGACGCGGTGCGCCGTTCGCGTGCCGGCATCTCCGACCCGAACCGTCCGA
CCGGATCGTTCCTGTTCCTCGGCCCCACCGGTGTGGGCAAGACCGAACTGGCCAAGGCGCTCGCCGACTTCCTGTTCGAC
GACGAGAAGGCCATGGTCCGCATCGACATGTCCGAATACATGGAGAAGGCTTCGGTCTCGCGCCTGATCGGCGCGGCGCC
GGGCTACGTGGGCTACGAGCAGGGCGGCCAGCTGACCGAGGCCGTGCGCCGTCGCCCGTATTCCGTGGTGCTGTTCGACG
AGGTCGAGAAGGCCAACCCGGAGATCTTCGACGTGCTGCTGCAGGTACTTGACGATGGTCGCCTGACCGATGGCCAGGGA
AGGACCGTGGACTTCAAGAACACGATCCTGATCATGACCTCCAACCTCGGCTCGCAGTTCCTCGTGAACGAGGACATGGA
CGCCGACGCCAAGAAAAAGGCCGTGATGGACGCCGTCCACATGAACTTCAAGCCGGAGTTCCTGAACCGTCTGGACGACA
TCGTCATGTTCCACCCGCTCACGCGTGAGGAGCTTGGCGGCATCGTGGATATCCAGGTGGCTGGCGTGGCCCAGCGTCTG
ACCGATCGCCGTATCACGCTGGACGTCACCGCGTCGGCCCGCGAATGGCTGGCCAACACCGGTTACGACCCGGCTTATGG
CGCTCGTCCGCTGCGCCGCCTGGTACAGACCGAAGTGGGCGACCAGCTGGCCCGTATGCTGCTGGCCGGCAAGGTCCACG
ATGGCGACACCGTGCTGGTCGACCAGACCGGTGGTGAGCATCTTGAGCTTTCCGCCTGGGCCGGCGACCAGATCGTCTCC
GACGACCCGGATGTGAGCGTGGACAACGTCACCGAAGATAAGTGA

Protein sequence :
MEEYDMEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDPQAIGAAVRNALVALPSASG
SSTSQPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDA
EGSYKALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQG
KKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGAT
TLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLV
DEAAAHLRMELDSSPEEIDELQRKVTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGD
LRAKLDDLRVQADKYTREGNLAEASKILYGEIPSIQKELAAAESADAESADASAANPADEPMVPDRVDADSVAEIVSDWT
GIPVGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFD
DEKAMVRIDMSEYMEKASVSRLIGAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQG
RTVDFKNTILIMTSNLGSQFLVNEDMDADAKKKAVMDAVHMNFKPEFLNRLDDIVMFHPLTREELGGIVDIQVAGVAQRL
TDRRITLDVTASAREWLANTGYDPAYGARPLRRLVQTEVGDQLARMLLAGKVHDGDTVLVDQTGGEHLELSAWAGDQIVS
DDPDVSVDNVTEDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-101 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BIL_05590 YP_007767177.1 ATP-dependent chaperone ClpB VFG2084 Protein 7e-109 42