Gene Information

Name : BIL_01550 (BIL_01550)
Accession : YP_007766835.1
Strain : Bifidobacterium longum F8
Genome accession: NC_021008
Putative virulence/resistance : Virulence
Product : ATPases with chaperone activity, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 172966 - 175575 bp
Length : 2610 bp
Strand : -
Note : -

DNA sequence :
ATGTTCGAACGGTTTACCGACCGTGCACGGCGCGTGATCGTGTTGGCGCAGGAAGAGGCGAGGGCCCTTCAGCACAACTA
CATCGGCACCGAACACCTGCTGCTCGGCCTGATCCGCGAAGGTGAGGGTGTAGCCGCCAAGGCACTCGCCTCGAAGGGCG
TGGAGCTGGATGCCACCCGCAAGCAGGTTGAAGAAATGATCGGCAAGGGCAACGCGGCTCCGAACGGGCACATCCCCTTT
ACTCCGCACGCCAAGCAGGTGTTGGAGTTTTCGCTGCGTGAAGCCCTGCAGCTGGGCCACAGCTACATCGGCACCGAGCA
CATCCTGCTCGGCCTGATTCGCGAAGGCGAAGGCGTGGGCACCCAGGTGCTCATCAAGATGGACGTCGATCTGGGCGAGT
TGCGTAGCGCGACCATCGATATGATTCGCGGCAACTCCGGCACCGGCACCGGTGACGGCAAGGGCGACTTGGCCAACGCC
GGCGGCGTGACGGACAAGCAGAACAAGTCCGGTTCCGCCATCCTCGATCAGTTCGGCCGCAACCTGACCGCCGAAGCCGC
TGAAGGCAAGCTGGACCCGGTCATCGGCCGTACCAACGAGATTGAGCGCGTTATGGTCGTGCTTTCCCGCCGCACCAAGA
ACAACCCGGTGCTGATCGGCGAGCCCGGCGTGGGCAAGACCGCTGTGGTCGAAGGCTTGGCCCAGAAGATCCAAGCCGGC
GACGTGCCGGAAACCCTGAAGGGCAAGCAGGTCTACTCGCTGGACCTCGGTTCCATGGTGGCAGGCTCCCGCTACCGTGG
TGATTTCGAGGAGCGCCTGAAGAAGGTGCTGAAGGAAATCAAGACTCGTGGCGACATCGTGCTGTTCATCGACGAGATTC
ACACCATCGTGGGCGCCGGCTCGGCTGACGGCGCGCTGGGTGCCTCCGACATGTTGAAGCCGATGCTGGCCCGTGGCGAG
CTCCAGACCATTGGTGCCACCACCACCGACGAGTACCGCAAGTACATCGAGAAGGACGCGGCTCTGGAACGCCGTTTCCA
GCCGATTCAGGTGCACGAGCCGACCATCGCCGAGACCATCGAGATCCTGAAGGGCCTGCGTTCCCGTTACGAGAACCACC
ACCACGTGACCATCACCGATGGCGCGCTGCAGTCTGCCGCAGAGCTGTCCAGCCGGTACATCCAGGACCGTAACCTGCCT
GACAAGGCCATCGACCTGATCGATGAGGCCGGTGCACGCCTGCGCATCAAGCGCCTGACCGCCCCGCCTGAGCTCAAGGA
ACTCGACGAGAAGATCGCCAAGATCGCCGCCGACAAGGACGAGGCCATCAAGGGCCAGGACTTCGAGAAGGCCGCCGAAC
TGCGCGACAAGCAGGAGAAGCTGGAAGCCGATCGCAAGCAGAAGGAAGACTCCTGGCGCGAAGGCGAGTCCGACGTCAAG
ATGGTCGTGGACGAGGACGTGATCGCCGAGGTCATCAGCTCCACCACCGGTATCCCGGTGTTCAAGCTGACTCAGGCCGA
GTCCAAGAAACTGCTCAACATGGAAGCCGAACTGCACAAGCGCATCATCGGCCAGGACGAGGCGGTTTCCGCCCTGTCCC
GCTCTATCCGCCGTACTCGCGTGGGTCTGAAGGACCCGAAGCGCCCGTCCGGTTCGTTCATCTTCGCCGGCCCCACCGGC
GTCGGCAAGACCGAGCTGGCCAAGACGCTCGCCGAATTCCTGTTCGACGATGAGGACGCGCTGATTCGCGTGGATATGTC
CGAGTTCTCCGAGAAGTACGCGGCTTCGCGACTCTTCGGTGCGCCTCCGGGATACGTCGGCTACGAGGAAGGCGGCGAGC
TCACCGAAAAGGTGCGCCGCAAGCCGTTCTCCGTGGTGCTGTTCGACGAGATCGAAAAGGCTCATCCGGACATCTTCAAC
ACGTTGCTGCAGGTGCTCGATGACGGCCACCTGACCGACGGTCAGGGCCGCAAGGTGGACTTTAAGAACACCATCATCAT
CCTGACCACCAACCTCGGTACGCGAGACATCGCCAAGGCCGCCAACACGGGCTTCAACCTAGGTGCCAACAACGAGTCCA
GCTACCAGCGCATGAAGGACCAGGTCAGCTCCGAATTGAAGCAGCAGTTCCGCCCGGAGTTCCTGAACCGTCTGGACGAC
ATCATCGTCTTCAAGCAGCTCACCGAGCCGCAGGTGCGCCAGATCGTGGATCTGGACGTCAAGCAGCTCAACGACCGCCT
GTTCGACCGTCATATGTCGCTCGAACTCACCGACGCCGCCAAGGACCTGCTCGCGCAGAAGGGCTTCGACCCGCTGCTCG
GTGCCCGTCCGCTGCGCCGCGTGATTCAGCGCGACATCGAGGACGCCATCTCCGAGAAGATCCTGATGGGCGATCTCGAA
GACGGTCAGCGCGTGATTGTGGATGCGGAAGGCGAGGGTATCCTCGGCGAATTCACCTTCAAGGGTGAGGAGTTCGAGGA
GCCGGCCGCCGCCGATAAGCCCGCCGAAGACGGTGCCGCCACTGATGGCGAGACTCCAGCCGACGCCACTCCGGCCACTG
AGCCGGCCGAATCCGCTCCCGCCGATTCCGGTGACGCTCCGCAGGAGTAG

Protein sequence :
MFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRKQVEEMIGKGNAAPNGHIPF
TPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATIDMIRGNSGTGTGDGKGDLANA
GGVTDKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAG
DVPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE
LQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSRYIQDRNLP
DKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADKDEAIKGQDFEKAAELRDKQEKLEADRKQKEDSWREGESDVK
MVVDEDVIAEVISSTTGIPVFKLTQAESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIFAGPTG
VGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFN
TLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAANTGFNLGANNESSYQRMKDQVSSELKQQFRPEFLNRLDD
IIVFKQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLE
DGQRVIVDAEGEGILGEFTFKGEEFEEPAAADKPAEDGAATDGETPADATPATEPAESAPADSGDAPQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BIL_01550 YP_007766835.1 ATPases with chaperone activity, ATP-binding subunit VFG0079 Protein 0.0 57
BIL_01550 YP_007766835.1 ATPases with chaperone activity, ATP-binding subunit VFG0080 Protein 3e-135 51