Gene Information

Name : dexB (SPN034156_14070)
Accession : YP_007765670.1
Strain : Streptococcus pneumoniae SNP034156
Genome accession: NC_021006
Putative virulence/resistance : Unknown
Product : glucan 1,6-alpha-glucosidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1442989 - 1444596 bp
Length : 1608 bp
Strand : +
Note : Locus encoding genes for capsule syntheis

DNA sequence :
ATGCAAGAAAAATGGTGGCATAATGCCGTAGTCTATCAAGTCTATCCAAAGAGTTTTATGGATAGTAATGGAGATGGAGT
TGGTGATTTGCCAGGTATTACCAGTAAGTTGGACTATCTAGCTAAGCTAGGAATCACAGCGATTTGGCTTTCTCCCGTTT
ATGACAGCCCTATGGATGATAATGGCTACGATATTGCTGATTATCAAGCGATTGCGGCTATTTTTGGAACCATGGAGGAC
ATGGATGAACTGATTGCAGAAGCTAAGAAGCGTGATATCCGTATCATCATGGACTTGGTGGTCAATCATACCTCGGATGA
GCATGCCTGGTTTGTAGAGGCCTGTGAAAATCCTAATAGCCCTGAGCGAGACTACTATATCTGGCGCGATGAACCCAATG
ACCTAGATTCTATCTTTAGTGGGTCTGCTTGGGAATACGATGAAAAGTCAGGTCAATACTATCTCCACTTTTTCAGCAAG
AAACAGCCGGATCTCAACTGGGAAAATGAAAAACTTCGCCAGAAAATTTATGAGATGATGAACTTCTGGATTGATAAGGG
TATTGGTGGTTTCCGTATGGATGTTATTGACATGATTGGCAAAATTCCTGACGAGAAGGTAGTCAATAATGGTCCTATGC
TCCATCCCTATCTCAAGGAAATGAATCAGGCGACCTTTGGAGATAAGGATCTCTTGACAGTAGGGGAGACTTGGGGAGCA
ACGCCAGAGATTGCCAAACTCTACTCTGATCCAAAGGGGCAAGAATTGTCTATGGTCTTCCAGTTTGAACATATCGGTCT
TCAGTATCAGGAAGGTCAGCCTAAATGGCACTATCAAAAAGAGCTGAATATCGCTAAGTTAAAAGAAATCTTCAACAAAT
GGCAGACAGAGTTAGGAGTTGAGGACGGCTGGAATTCCCTCTTCTGGAACAACCATGACCTCCCTCGTATTGTCTCAATC
TGGGGAAATGACCAAGAATACCGCGAAAAATCTGCCAAAGCCTTTGCAATCTTGCTTCATCTTATGAGAGGAACTCCTTA
TATCTACCAAGGTGAGGAGATTGGGATGACCAACTATCCGTTTGAAACACTGGATCAAGTAGAAGATATTGAATCTCTCA
ACTATGCGCGTGAGGCTCTTGAAAAAGGTGTTCCGATGCAAGAAATCATGGACAGTATCCGTGTTATTGGACGTGACAAT
GCCCGTACCCCTATGCAATGGGACGAGAGCAAAAACGCTGGTTTCTCAACAGGTCAACCTTGGTTGGCAGTTAATCCAAA
TTACGAGATGATCAACGTCCAAGAAGCGCTGGCAAATCCAGATTCTATTTTCTATACCTATCAGAAACTGGTCCAAATTC
GCAAGGAGAATAGTTGGCTAATTCGAGCTGACTTTGAATTGCTTGATACGGCTGATAAGGTCTTTGCTTATATACGTAAG
GATGGCGACCGTCGCTTCCTAGTTGTGGCTAACTTGTCCAATGAAGAGCAAGACTTGACAGTAGAAGGAAAAGTCAAATC
TGTCTTGATTGAAAACACCCTAGCTCAAGAAGTCTTTGAAAAACAAATCTTAGTTCCATGGGATGCTTTCTGTGTGGAAT
TACTATAA

Protein sequence :
MQEKWWHNAVVYQVYPKSFMDSNGDGVGDLPGITSKLDYLAKLGITAIWLSPVYDSPMDDNGYDIADYQAIAAIFGTMED
MDELIAEAKKRDIRIIMDLVVNHTSDEHAWFVEACENPNSPERDYYIWRDEPNDLDSIFSGSAWEYDEKSGQYYLHFFSK
KQPDLNWENEKLRQKIYEMMNFWIDKGIGGFRMDVIDMIGKIPDEKVVNNGPMLHPYLKEMNQATFGDKDLLTVGETWGA
TPEIAKLYSDPKGQELSMVFQFEHIGLQYQEGQPKWHYQKELNIAKLKEIFNKWQTELGVEDGWNSLFWNNHDLPRIVSI
WGNDQEYREKSAKAFAILLHLMRGTPYIYQGEEIGMTNYPFETLDQVEDIESLNYAREALEKGVPMQEIMDSIRVIGRDN
ARTPMQWDESKNAGFSTGQPWLAVNPNYEMINVQEALANPDSIFYTYQKLVQIRKENSWLIRADFELLDTADKVFAYIRK
DGDRRFLVVANLSNEEQDLTVEGKVKSVLIENTLAQEVFEKQILVPWDAFCVELL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 2e-118 49