Gene Information

Name : ECBG_02995 (ECBG_02995)
Accession : YP_007754307.1
Strain : Enterococcus casseliflavus EC20
Genome accession: NC_020995
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit ClpC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3349264 - 3351744 bp
Length : 2481 bp
Strand : -
Note : -

DNA sequence :
ATGGATGAATTATTCACCCAACGCGCGAAAGCCGTTTTGGCTATCGCCCAAGAAGAAGCAAAATACTTTAAGCACCAAGC
GGTAGGTTCTGAACATATTCTATTGGCACTGGTCATTGAACAAAACGGGATCGCTGGCAAAACGTTACGGGAAATGAATA
TCACAGAAAACGATATTCGTGAAGAAATCGAACATTTAACAGGGTACGGCACCGTTCGTCAATACCCAGAAAACGCCTAT
CTCGCGTATTCACCACGAGCAAAACATACATTTGCTTATGCAGGGGATGAAGCCAAGCGTTTAGGGGCACCACAGATCGG
TACCGAACATCTATTATTAGGCTTATTAAGAGACGAAGACATTTTGGCTTCACGAATCATGCTGAATCTCGGCTTGAGTC
TCGCAAAAATGCGTCAGCTTTTGAAGAAAAAAATGGGCTTCAATGAAAGCAAAACCAACGGAAGTGCTGGTCGTCGTCGT
CCAGCCCAAGCCAAAGCGCAGCAAGGAACACCAACCTTGGATTCCTTAGCCCGTGATTTGACCAAATTAGCTCGTGAAAA
ACGGCTAGATCCTGTTGTCGGTCGTGCCAAAGAAGTCAAACGGCTGATCCAGATCCTTAGCCGTCGGACCAAAAATAACC
CTGTTCTCGTTGGGGAACCTGGTGTTGGGAAAACCGCGATCGCTGAAGGCTTAGCCCAAAAAATCATCAATGGGGAAGTC
CCAGAAGACATGCAAAACAAACGTTTGATGATGCTGGACATGGGGGCTTTAGTTGCTGGAACGAAATACCGTGGAGAATT
TGAGGACCGAATGAAAAAAATCATCGATGAGATCTATCAAGATGGTCAAATCATCTTATTCATTGATGAATTGCATACAC
TGATTGGGGCCGGCGGAGCCGAAGGGGCGATTGATGCCTCGAATATTCTGAAACCAGCCTTAGCCCGTGGAGAATTGCAA
ACCATCGGTGCCACGACATTAGATGAGTACCAAAAATACATTGAAAAAGATTCTGCGTTAGAACGCCGTTTTGCCCGAGT
GCAAGTCGATGAACCAACACCAGAAGAAGCGGAAGAAATTTTGCGCGGCTTGCGACCTCGTTATGAAGAACATCATGGGG
TGGAAATTTCTGATGATGCGTTACACGCCGCTGTGCAATTGTCCGTACGTTACATCAATTCGCGCCAGTTACCAGATAAA
GCCATCGATTTGATGGATGAATCAGCAGCCAAAGTGCGTCTAGACAAAACCGATGAAAGTTCGGAATTGGCAGATCTACA
AAACGAGATCGCTAACTTGATCGAAGAAAAAGAAGCAGCCATTCGCCAGCAAGATTTTGAAGCAGCAGCTCGTCTGCGGA
TCAAGGAAAAGAAATTGACCCAACAATTGACGGAAGTGGCGTTTATGGAAGTCAAAGAAGCGTCAGGCTATGCCGATAGT
GTTACTGCAGAAGATGTTGCTACGGTCGTTTCTCAATGGACTGGTGTACCTTTGCAACAGATGGAGAAAAAAGAAAGCGA
ACGCTTGTTGGATCTTGAAAAGATCTTGCATCAACGGGTAGTTGGCCAAGAAGAAGCGGTCAAAGCAGTCGCTCGTTCGA
TCCGCCGAGCCCGCAGTGGGTTGAAAGACCCCAACCGCCCAATTGGTTCCTTCATGTTCTTAGGCCCGACTGGTGTCGGG
AAAACCGAGCTTGCCAAAGCCTTAGCAGAAGCGATGTTTGGTAGTGAAGATGCCTTGGTTCGTGTCGATATGTCCGAATT
TATGGAAAAATACAGCACGAGCCGTTTGATCGGTTCACCGCCAGGCTATGTCGGCTATGACGAAGGTGGGCAATTGACGG
AAAAAATCCGTTCAAAACCTTACTCCGTCATCTTATTGGACGAGGTGGAAAAAGCCCATCCCGATGTCTTCAATATCCTC
TTGCAAGTGCTAGATGATGGACATTTGACGGATGCCAAAGGTCGGAAGGTCGATTTCCGCAACACGATTTTGATCATGAC
CTCTAATATCGGTGCCCAACAAATCCGCGAAGAAAAAAGCGTTGGATTCAATGTCACTGATTTAACGAAAGATCACCAAG
CGATGCAAAAACGGATCTTAGAAGAGCTGAAAAAAGCCTTCCGTCCAGAGTTCTTGAACCGTGTGGATGAAACAGTGGTC
TTCCAATCCTTAGGTGAAGGGGAGATCCACGAGATCGTGAAGATTATGAGCAAAGCGATCATCAAACGGTTAAGCAACCA
AGACATCCAATTGAAGATCACGCCATCTGCCATCGATGTGATCGGTAAAGCTGGTTTTGATCCAGAATATGGGGCACGGC
CGATTCGTCGAGCATTGCAAAAAGAAGTCGAAGACCGTTTAAGTGAAGCACTCCTATCAGGACAAATTCATTTAGGTGAC
AAAGTGACGATTGGTGCTTCCAAAGGATCGATCACCCTCAATGTCAAAGAGGGACAAGCACGGGTCTTGCAACAAGTGTA
A

Protein sequence :
MDELFTQRAKAVLAIAQEEAKYFKHQAVGSEHILLALVIEQNGIAGKTLREMNITENDIREEIEHLTGYGTVRQYPENAY
LAYSPRAKHTFAYAGDEAKRLGAPQIGTEHLLLGLLRDEDILASRIMLNLGLSLAKMRQLLKKKMGFNESKTNGSAGRRR
PAQAKAQQGTPTLDSLARDLTKLAREKRLDPVVGRAKEVKRLIQILSRRTKNNPVLVGEPGVGKTAIAEGLAQKIINGEV
PEDMQNKRLMMLDMGALVAGTKYRGEFEDRMKKIIDEIYQDGQIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQ
TIGATTLDEYQKYIEKDSALERRFARVQVDEPTPEEAEEILRGLRPRYEEHHGVEISDDALHAAVQLSVRYINSRQLPDK
AIDLMDESAAKVRLDKTDESSELADLQNEIANLIEEKEAAIRQQDFEAAARLRIKEKKLTQQLTEVAFMEVKEASGYADS
VTAEDVATVVSQWTGVPLQQMEKKESERLLDLEKILHQRVVGQEEAVKAVARSIRRARSGLKDPNRPIGSFMFLGPTGVG
KTELAKALAEAMFGSEDALVRVDMSEFMEKYSTSRLIGSPPGYVGYDEGGQLTEKIRSKPYSVILLDEVEKAHPDVFNIL
LQVLDDGHLTDAKGRKVDFRNTILIMTSNIGAQQIREEKSVGFNVTDLTKDHQAMQKRILEELKKAFRPEFLNRVDETVV
FQSLGEGEIHEIVKIMSKAIIKRLSNQDIQLKITPSAIDVIGKAGFDPEYGARPIRRALQKEVEDRLSEALLSGQIHLGD
KVTIGASKGSITLNVKEGQARVLQQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 50
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 8e-97 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECBG_02995 YP_007754307.1 ATP-dependent Clp protease ATP-binding subunit ClpC VFG0079 Protein 0.0 61
ECBG_02995 YP_007754307.1 ATP-dependent Clp protease ATP-binding subunit ClpC VFG0080 Protein 2e-153 50