Gene Information

Name : H375_8310 (H375_8310)
Accession : YP_007751110.1
Strain : Rickettsia prowazekii Breinl
Genome accession: NC_020993
Putative virulence/resistance : Resistance
Product : Lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1005220 - 1005858 bp
Length : 639 bp
Strand : -
Note : lipoprotein transporter ATP-binding subunit PRK11629; Lipoprotein-releasing system ATP-binding protein LolD of typhus group UniRef RepID=LOLD_RICPR

DNA sequence : 
ATGATCTCAAAACATTATAAACAAGGCAACACTATTGTTAGAGTACTAGATGGTCTTAATCTAACAGCTAATGAAGGTGA
ATTAATTGCTATCATCGGGTCTTCAGGTAGTGGAAAATCAACTTTACTACATATTGCAGGCTTGCTTGATAAGCCTACAA
ACGGTCAAGTCATAATACCAAATATCAAGTATAAGAAATATCATCTAATCCGTCTTTATTACTTAGGTTTTATCTATCAA
CAACATCATTTACTCAAAGATTTTACCGCTCTTGAAAATGTTATCATACCAAGACTTATTAGAGGTCTTGATCAAAAAGA
AGCAATAAAAGATGCAACAAAGATATTAGATGATTTAGGACTTGAAAAAAAACTCTATAATATGCCCGGAGAATTATCGG
GAGGAGAACAACAAAGGGTAGCTATAGCTCGCAGCTTAATTAATAAGCCGAGAATTATTTTGGCTGATGAGCCAACAGGT
AATTTAGATCCAAACACTACAAATGAAGTTTTTAACTTATTTTTAAAAGTCGCAAGAAAACAAAATACTACAGTTATTAT
GGTAACACATAACCATGAATTAGCACATAAAATGGATAAATTATATAATCTAAAGCATGGATTATTAAATATAGCTTGA

Protein sequence : 
MISKHYKQGNTIVRVLDGLNLTANEGELIAIIGSSGSGKSTLLHIAGLLDKPTNGQVIIPNIKYKKYHLIRLYYLGFIYQ
QHHLLKDFTALENVIIPRLIRGLDQKEAIKDATKILDDLGLEKKLYNMPGELSGGEQQRVAIARSLINKPRIILADEPTG
NLDPNTTNEVFNLFLKVARKQNTTVIMVTHNHELAHKMDKLYNLKHGLLNIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-23 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-23 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H375_8310 YP_007751110.1 Lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 2e-27 44
H375_8310 YP_007751110.1 Lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene598.p Protein 8e-29 43
H375_8310 YP_007751110.1 Lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 7e-28 41