Gene Information

Name : XNR_3179 (XNR_3179)
Accession : YP_007746525.1
Strain : Streptomyces albus J1074
Genome accession: NC_020990
Putative virulence/resistance : Virulence
Product : Chaperone protein ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3628044 - 3630629 bp
Length : 2586 bp
Strand : +
Note : -

DNA sequence :
GTGGACGCAGAGCTGACCAACAGGAGCCGGGACGCGCTGAACGCGGCGACCACCCGGGCGGTTTCGGCGGGCAACCCGGA
CCTGACCCCGGCCCACCTGCTCCTGGCCCTCCTGGAGGGGCAGGACAACGAGAACCTGGTCGACCTCCTGGCCGCCGTCG
AGGCCGACCAGGCGGCGGTCCGCGCGGGCACCGAGCGCGTCCTCGGCTCGCTCCCCGGCGTCACCGGCTCGACCGTCGCC
CCGCCGCAGCCCAACCGGGACCTGCTCGCGGTCATCGCCGACGCCGGCCGGCGCGCCAAGGACCTGGGCGACGAGTTCCT
CTCCACCGAGCACCTGCTGATCGGCATCGCCGCCAAGGGCGGCCAGGCCGCCGAGGTGCTCACCGGGCAGGGCGCGACGC
CCGAGAAGCTGCTGGAGGCATTCCAGAACACACGAGGAGGACGCCGGGTGACCACGCCCGACCCCGAGGGGCAGTACAAG
GCGCTGGAGAAGTTCGGTACGGACTTCACGGCCGCCGCCCGTGAGGGCAAGCTCGACCCGGTCATCGGCCGGGACCAGGA
GATCCGCCGCGTCGTGCAGGTGCTCTCGCGGCGCACCAAGAACAACCCGGTCCTCATCGGCGAGCCCGGCGTCGGCAAGA
CCGCCGTCGTGGAGGGGCTGGCCCAGCGCATCGTCAAGGGCGACGTCCCCGAGTCGCTGAAGGACAAGCGGCTCGTCTCG
CTCGACCTCGGCGCGATGGTCGCGGGCGCCAAGTACCGCGGCGAGTTCGAGGAGCGGCTGAAGACGGTCCTCTCCGAGAT
CAAGGAGAGCGACGGCCAGATCGTCACCTTCATCGACGAGCTGCACACCGTGGTCGGCGCGGGCGCCGGCGGCGACTCCG
CCATGGACGCGGGGAACATGCTCAAGCCCATGCTGGCCCGCGGCGAGCTGCGCATGGTCGGCGCGACGACGCTCGACGAG
TACCGCGAGCGGATCGAGAAGGACCCGGCGCTGGAGCGCCGCTTCCAGCAGGTGCTGGTGGCCGAGCCCAGCGTCGAGGA
CTCCATCGCGATCCTGCGCGGCCTCAAGGGCCGGTACGAGGCGCACCACAAGGTGCAGATCGCGGACAGCGCGCTGGTGG
CCGCCGCGACCCTCTCCGACCGGTACATCACCTCCCGGTTCCTGCCCGACAAGGCCATCGACCTGGTCGACGAGGCGGCC
TCCCGGCTGCGCATGGAGATCGACTCCTCGCCGCTGGAGATCGACGAGCTCCAGCGCTCGGTCGACCGGCTGAAGATGGA
GGAGCTGGCGCTCGACCGGGAGACCGACCCGGCCTCCCGGCAGCGGCTGGAGAAGCTCCGCCGCGACCTCGCCGACCGCG
AGGAGGAGCTGCGCGGGCTCACCGCCCGCTGGGAGAAGGAGAAGCAGTCCCTCAACCGCGTCGGCGAGCTGAAGGAGCGC
CTGGACGAACTGCGCGGCCAGGCCGAACGCGCCCAGCGCGACGGCGACTTCGACACCGCCTCCAAGCTGCTCTACGGCGA
GATCCCCACCCTGGAGCGGGACCTGGAGGTGGCGTCCGAGGCCGAGGAGGAGGCCGCCAAGGACACCATGGTCAAGGAGG
AGGTCGGCCCCGACGACATCGCGGACGTGGTCGGTTCCTGGACCGGCATCCCGGCCGGGCGCCTGCTGGAGGGCGAGACG
CAGAAGCTGCTGCGGATGGAGGCCGAGCTGGGCCGCCGCCTGATCGGCCAGAGCGAGGCCGTCCAGGCCGTCTCGGACGC
GGTGCGCCGCACCCGGGCCGGGATCGCCGACCCGGACCGCCCGACCGGCTCGTTCCTCTTCCTCGGCCCGACCGGCGTCG
GCAAGACCGAGCTGGCCAAGGCGCTCGCCGACTTCCTCTTCGACGACGAGCGGGCCATGATCCGCATCGACATGAGCGAG
TACGGCGAGAAGCACTCGGTGGCCCGCCTGGTCGGCGCGCCTCCCGGCTACGTCGGGTACGAGGAGGGCGGCCAGCTCAC
CGAGGCCGTGCGGCGCCGTCCGTACAGCGTGGTGCTGCTGGACGAGGTGGAGAAGGCGCACCCGGAGGTCTTCGACATCC
TGCTCCAGGTGCTGGACGACGGGCGGCTCACCGACGGGCAGGGCCGGACGGTCGACTTCCGGAACACCATCCTGGTGCTG
ACCAGCAACCTCGGCAGCCAGTACCTGGTCGGCTCCGCGCCCGAGGAGGAGAAGCGGCGGCAGGTCATGGAGGTGGTCCG
CTCCTCCTTCAAGCCGGAGTTCCTCAACCGGCTGGACGACCTGGTGATCTTCTCCGCCCTGGACGAGGACGAGCTGGCCC
GGATCGCCGGGCTCCAGATCGCCGGGCTGGCCAGGCGCCTCGCCGACCGCCGCCTGAGCCTGGACGTGACGCCCGAGGCG
CTGGCCTGGCTGGCCAAGGAGGGGTTCGACCCGGCGTACGGCGCCCGGCCGCTGCGCCGCCTGATCCAGACGGCCATCGG
CGACCGGCTCGCCAAGGAGATCCTGGCCGGCGAGGTCCGCGACGGCGACACGGTCCGCGTCGACCGCGTCGAGGACGGCC
TCCTCGTCGGCCGCGCCGAGGGCTGA

Protein sequence :
MDAELTNRSRDALNAATTRAVSAGNPDLTPAHLLLALLEGQDNENLVDLLAAVEADQAAVRAGTERVLGSLPGVTGSTVA
PPQPNRDLLAVIADAGRRAKDLGDEFLSTEHLLIGIAAKGGQAAEVLTGQGATPEKLLEAFQNTRGGRRVTTPDPEGQYK
ALEKFGTDFTAAAREGKLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLKDKRLVS
LDLGAMVAGAKYRGEFEERLKTVLSEIKESDGQIVTFIDELHTVVGAGAGGDSAMDAGNMLKPMLARGELRMVGATTLDE
YRERIEKDPALERRFQQVLVAEPSVEDSIAILRGLKGRYEAHHKVQIADSALVAAATLSDRYITSRFLPDKAIDLVDEAA
SRLRMEIDSSPLEIDELQRSVDRLKMEELALDRETDPASRQRLEKLRRDLADREEELRGLTARWEKEKQSLNRVGELKER
LDELRGQAERAQRDGDFDTASKLLYGEIPTLERDLEVASEAEEEAAKDTMVKEEVGPDDIADVVGSWTGIPAGRLLEGET
QKLLRMEAELGRRLIGQSEAVQAVSDAVRRTRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMIRIDMSE
YGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTILVL
TSNLGSQYLVGSAPEEEKRRQVMEVVRSSFKPEFLNRLDDLVIFSALDEDELARIAGLQIAGLARRLADRRLSLDVTPEA
LAWLAKEGFDPAYGARPLRRLIQTAIGDRLAKEILAGEVRDGDTVRVDRVEDGLLVGRAEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-96 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNR_3179 YP_007746525.1 Chaperone protein ClpB VFG2076 Protein 3e-111 43
XNR_3179 YP_007746525.1 Chaperone protein ClpB VFG2084 Protein 4e-102 42