Gene Information

Name : XNR_2663 (XNR_2663)
Accession : YP_007746035.1
Strain : Streptomyces albus J1074
Genome accession: NC_020990
Putative virulence/resistance : Unknown
Product : subunit of transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3023341 - 3024225 bp
Length : 885 bp
Strand : +
Note : similar to ORF2 of the IS3 family

DNA sequence :
GTGATCGACCACCTGCGTGACAACGGTCTCGGGGCCGATCCCGTCTGCCGGGTGCTGGGCCTGTCGCCGTCGACGTACTT
CGCCCGCAAGAAGCGGCCGAAGTCGGCCCGTCGGCTCCGCGACGAACAGCTCGTGCCGGTGATCGAGCAGGTCCACGCCG
AGTCCGCCGGCACGTATGGGACCCGTCGGATCACCCGCGCCCTGCGGCGCAAGGGTGTTGAGGTGGCCCGCTGCACCGTC
GAGCGGCTCATGGCCGAACACGGACTGGAGGGCGTGATCCGTGGCCGGCGGCGCCGCACCACGATCCCGGAGCCGTCGGC
GCCCCGACCGCCGGACCTGGTGGACCGCAACTTCACCGCGGCGCGGCCCGATCAGCTGTGGGTGGCGGACGTGACATATG
TCCGCACGTGGTCGGGCTGGGCATATGTGGCGTTCGTCCTGGACGTGTACTCACGGATGATCGTCGGCTGGCAGATCGCC
GACCACATGCGGACCGAACTGCCTCTGGACGCCCTGGAGATGGCGCTCTGGCGCCGACGCATCAAGAAGGACTCCGGCCT
CATTCACCACAGCGACAGGGGCTCGCAACATGTGTCGATTCGCTACACCGACCGACTCGCGGACATCGGCGCCTCCGCGT
CGGTCGGTTCCGTCGCGGACTCGTACGACAATGCCATGGCCGAGGCACAGAACGGCACTTTCAAGGCCGAGCTGATCGAG
ATGCAGGGCCCCTGGAAGGACCCCGCCCAGGTCGAACGGGCGATCTTCCAGTGGATCACCTGGTACAACGAAGAACGCCT
GCACTCCGCGCTCGACTACGTGCCACCCGCCGAGTACGAACGCGGCTTCTGGCAGCGCCAGGAACGAGTCCCCCAATCCG
CCTGA

Protein sequence :
MIDHLRDNGLGADPVCRVLGLSPSTYFARKKRPKSARRLRDEQLVPVIEQVHAESAGTYGTRRITRALRRKGVEVARCTV
ERLMAEHGLEGVIRGRRRRTTIPEPSAPRPPDLVDRNFTAARPDQLWVADVTYVRTWSGWAYVAFVLDVYSRMIVGWQIA
DHMRTELPLDALEMALWRRRIKKDSGLIHHSDRGSQHVSIRYTDRLADIGASASVGSVADSYDNAMAEAQNGTFKAELIE
MQGPWKDPAQVERAIFQWITWYNEERLHSALDYVPPAEYERGFWQRQERVPQSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 3e-39 56
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 6e-39 55
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 1e-43 53
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-49 50
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 3e-48 50
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 3e-48 50
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 3e-48 50
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 2e-48 50
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-49 50
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-49 50
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 2e-49 50
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-49 50
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-35 50
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 2e-49 49
Z1198 NP_286733.1 transposase Not tested TAI Protein 1e-49 49
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 7e-49 49
Z1638 NP_287141.1 transposase Not tested TAI Protein 1e-49 49
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-49 49
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 7e-50 49
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 9e-50 49
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-47 49
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 2e-48 48
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 5e-32 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNR_2663 YP_007746035.1 subunit of transposase VFG1602 Protein 1e-47 49