Gene Information

Name : XNR_2662 (XNR_2662)
Accession : YP_007746034.1
Strain : Streptomyces albus J1074
Genome accession: NC_020990
Putative virulence/resistance : Unknown
Product : subunit of transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3023033 - 3023344 bp
Length : 312 bp
Strand : +
Note : orf1; similar to ORF1 of the IS3 family

DNA sequence :
ATGCCAGCACCCCGTAAGTACCCCGATGAACTTCGTGAGCGGGCGGTCCGCGAGGTCCGCGCCACCGGCCGCCCGATCGC
GCATCTCGCGAAGGACCTCGGCATTCACAAGGAGGCCCTGCGCGGCTGGGTCCGCCAGGCAGAGGCCGACTATGGCGAAC
GCAACGACCGGCTGACCACAGCCGAGCACGACGAGCTCAAACAGCTCCGCAAAGAAGTAGCGGAGTTGCGGCGGGCCAAC
GAGATCCTCAAGGCCGCCTCGGTGTTTTTTGCCCAGGAGATCGACCGTCCCCGGACGAGGCCGAGCAGGTGA

Protein sequence :
MPAPRKYPDELRERAVREVRATGRPIAHLAKDLGIHKEALRGWVRQAEADYGERNDRLTTAEHDELKQLRKEVAELRRAN
EILKAASVFFAQEIDRPRTRPSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF09023.1 unknown Not tested SHI-O Protein 6e-07 47
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 1e-09 47
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-07 47
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 6e-07 47
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 1e-09 47
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-07 47
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 6e-07 47
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 1e-09 47
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 9e-07 47
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 6e-07 47
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 1e-09 47
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 9e-07 47
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 8e-10 47
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 8e-10 47
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 3e-06 47
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 8e-10 47
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 8e-10 47
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 1e-09 47
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 8e-05 46
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 1e-05 46
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-05 46
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 9e-09 46
SF3706 NP_709445.1 IS629 ORF1 Not tested SHI-2 Protein 7e-06 46
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 9e-09 46
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-06 46
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 2e-06 46
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 9e-09 46
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-06 46
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 2e-06 46
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 3e-06 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNR_2662 YP_007746034.1 subunit of transposase VFG1603 Protein 1e-06 47
XNR_2662 YP_007746034.1 subunit of transposase VFG0643 Protein 2e-07 47
XNR_2662 YP_007746034.1 subunit of transposase VFG0606 Protein 2e-06 46
XNR_2662 YP_007746034.1 subunit of transposase VFG1717 Protein 7e-07 46