Gene Information

Name : XNR_2611 (XNR_2611)
Accession : YP_007745983.1
Strain : Streptomyces albus J1074
Genome accession: NC_020990
Putative virulence/resistance : Virulence
Product : Fe uptake system permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2976204 - 2977046 bp
Length : 843 bp
Strand : -
Note : -

DNA sequence : 
ATGACCCACCGCACCGCCCCCGCCCCCGCCGACCCGGGCTTCGGCGCCGCCGCCCCCGGCTCGCTGCGCGCCGAAGGGCT
CGGCTACCGCCTCCCCCCGCCCGGCCGGGGCCGCGCGGGTGCCCTCCTTCTCGACGGCGTCGACCTGGAGGTGGCCCCCG
GCGAGACGGTCGGCGTGGTCGGCCCCAACGGCAGCGGCAAGACCACCCTGCTCCGCTGCGTCTACGGCACCCTCACCGCC
ACCTCGGGCCGGCTGCTCCTCGACGGGCAGGACGCGGCCGGCCTCACCGCCAAGGAGCGGGCCCGCCTGGTGGCCGCCGT
ACCGCAGGACGCCACCGGCGCCTTCGGCCTGACCGTCCGTGAGACCGTCGCCATGGGCCACAGCCCGCACAAGCGCTTCT
GGGAGGGCGACACCGCCGAGGACGCCGCCCAGTGCCGGGCCGCCCTGGAACGCGTCGGCGCCGCCCACCTCGCCGACCGC
CGCCTCGACGAACTCTCCGGCGGCGAACGCCAGCGCGCCCTGATCGCCCGCGCCCTGGTCCAGCGCCCCCGCATCCTCGC
CCTGGACGAGCCCACCAACCACCTGGACATCCGCTACCAGCTGGACATCCTCCACCTGGCCCGCACCCTGCCCCCGACCG
TCCTCGTCGTCCTCCACGACCTCAACCTCGCCGCCGCCTACTGCGACCGCCTCTACGTCCTGGCCGCCGGCCGCGTCGTC
GCCACCGGCACCCCCGCCGAGGTACTCACCGAGGAACTCCTGCACGACGTCTACGGCGTCCACACCCGTATCGGGCCGCA
CCCGGTGACCGGAAGGCCGAACGTGGTGTACGTGCCGGAGTGA

Protein sequence : 
MTHRTAPAPADPGFGAAAPGSLRAEGLGYRLPPPGRGRAGALLLDGVDLEVAPGETVGVVGPNGSGKTTLLRCVYGTLTA
TSGRLLLDGQDAAGLTAKERARLVAAVPQDATGAFGLTVRETVAMGHSPHKRFWEGDTAEDAAQCRAALERVGAAHLADR
RLDELSGGERQRALIARALVQRPRILALDEPTNHLDIRYQLDILHLARTLPPTVLVVLHDLNLAAAYCDRLYVLAAGRVV
ATGTPAEVLTEELLHDVYGVHTRIGPHPVTGRPNVVYVPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-44 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-38 45
irp6C YP_005124377.1 ATP-binding protein Irp6C Virulence Not named Protein 3e-26 41
irp6C NP_938506.1 ATP-binding protein Irp6C Not tested Not named Protein 4e-27 41
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 4e-26 41
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 4e-26 41
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 4e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNR_2611 YP_007745983.1 Fe uptake system permease BAC0164 Protein 1e-38 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNR_2611 YP_007745983.1 Fe uptake system permease VFG1042 Protein 1e-38 45
XNR_2611 YP_007745983.1 Fe uptake system permease VFG0925 Protein 6e-32 41