Gene Information

Name : XNR_2334 (XNR_2334)
Accession : YP_007745709.1
Strain : Streptomyces albus J1074
Genome accession: NC_020990
Putative virulence/resistance : Virulence
Product : ABC-type Fe3+-siderophore transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2727059 - 2727913 bp
Length : 855 bp
Strand : -
Note : -

DNA sequence :
ATGACCCGCCCCGCCGCCCGCCTCACCGCCCGGGACCTCACCCTCGCCTACGAGGACCGCACCGTCGTCCCCGGCCTCGA
CCTGGACATCCCCGACGGCCGGGTCACCGTCATCATCGGGCCCAACGCCTGCGGCAAGTCCACCACCCTGCGGGCGCTCG
GCCGGCTGCTGCGCCCCGCCGGCGGCGCCGTCCTGCTCGACGGCGCGGAACTGGCCCGGCTGCCCACCCGCCAGATCGCC
CGGCAGATCGGGCTGCTGCCGCAGACCCCGGTGGCACCGGAGGCGATCACCGTGGCCGACCTGGTGGCACGCGGCCGCCA
GCCGCACCAGCGGTGGTGGCAGCAGTGGTCCGAGGAGGACGAGCGGGCGGTCACCGAGGCGATGGCCCGCACCGCCACCA
CCGACCTCGCCGACCGTCCCGTGGACGCCCTCTCCGGTGGCCAGCGGCAGCGCGTCTGGATCGCCATGGCCCTCGCCCAG
GAGACCGGCCTGCTCCTGCTCGACGAGCCCACCACCTATCTCGACCTCGCCCACCAGGTCGAGGTCCTCGACCTGGTCCG
CCGCCTCAACCGCGAGCAGGGCCGCACCGTCGTCCTCGTCCTGCACGACCTCAACCAGGCCGCCCGTTACGCCGATCACC
TCATCGCCTTCCGGGAGGGCCGCGTCGTCGCCGAGGGCGCCCCCGCCGAGGTCGTCACCGCCGGCCTGGTCCGGGAGATC
TTCGGCCTGGAGTGCGTCGTCGTCCCGGACCCCGTCACCGGCTCCCCGCTCGTCGTCCCGGGCGCGCCCTGGGACGCCCG
GCCGGCGCCGGAACCCGCTGTCCCCACCCGAGAAGAAAGCAGGGCCACGCCATGA

Protein sequence :
MTRPAARLTARDLTLAYEDRTVVPGLDLDIPDGRVTVIIGPNACGKSTTLRALGRLLRPAGGAVLLDGAELARLPTRQIA
RQIGLLPQTPVAPEAITVADLVARGRQPHQRWWQQWSEEDERAVTEAMARTATTDLADRPVDALSGGQRQRVWIAMALAQ
ETGLLLLDEPTTYLDLAHQVEVLDLVRRLNREQGRTVVLVLHDLNQAARYADHLIAFREGRVVAEGAPAEVVTAGLVREI
FGLECVVVPDPVTGSPLVVPGAPWDARPAPEPAVPTREESRATP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-66 61
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-55 52
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-55 52
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-55 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-55 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-48 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-56 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-56 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-46 46
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNR_2334 YP_007745709.1 ABC-type Fe3+-siderophore transport system, ATPase component BAC0164 Protein 8e-49 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNR_2334 YP_007745709.1 ABC-type Fe3+-siderophore transport system, ATPase component VFG0925 Protein 4e-61 60
XNR_2334 YP_007745709.1 ABC-type Fe3+-siderophore transport system, ATPase component VFG1042 Protein 7e-49 49