Gene Information

Name : XNR_1367 (XNR_1367)
Accession : YP_007744759.1
Strain : Streptomyces albus J1074
Genome accession: NC_020990
Putative virulence/resistance : Virulence
Product : Two-component response regulator KdpE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1628330 - 1629013 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence :
ATGGCCCGGGTGCTCGTGGTGGAGGACGACGCGCAACTGGCGCGCGCCCTGCGGATCAATCTGGAGGTGCGCTCCTACGA
GGTGGCGGCCGCCCGGGACGGGGACGGCGCGCTCCGGCTCTTCGCGACCGGCGAACCGGACGCCGTCCTGCTGGACCTCG
GTCTGCCGGACACGGACGGCGTCGAACTGATCAAGGCGATCAGGAGCCGGAGCCGGGCGCCGATCCTGGTGCTCTCGGCG
CGCCACCTGTCCGGGGAGAAGGTCCGGGCGCTGGACGCGGGCGCCGACGACTACGTGACCAAGCCGTTCAGCATGGACGA
ACTGCTGGCCAGGCTGCGGGCGGCCACCCGCAGGCGCCGGGCGACGGCGGAGGCCGAGGCGCTGACGGTGGTGACCACCG
ATCACTTCACCATCGACCTGCCGGCCAAGAAGCTGCTCCGCGAGGGCCACCCGGTCCGGCTGACCCCGACCGAGTGGCAC
CTGCTGGAGATCCTGGCCGCCAGCCCCGGCCGCCGGGTCTCCCAGCGCGCCCTGCTGCTGGAGGTCTGGGGCCCCGCCTA
CGCCGAGAACACCAACTACCTGCGGGTCTACATGGCCCAGCTGCGGCGCAAGCTGGAGGCGGACCCGTCCCGTCCCCGGT
ACCTCATCACCGAGCCCGGCCTCGGCTACCGCTTCGAGCCCTGA

Protein sequence :
MARVLVVEDDAQLARALRINLEVRSYEVAAARDGDGALRLFATGEPDAVLLDLGLPDTDGVELIKAIRSRSRAPILVLSA
RHLSGEKVRALDAGADDYVTKPFSMDELLARLRAATRRRRATAEAEALTVVTTDHFTIDLPAKKLLREGHPVRLTPTEWH
LLEILAASPGRRVSQRALLLEVWGPAYAENTNYLRVYMAQLRRKLEADPSRPRYLITEPGLGYRFEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 2e-25 41
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 3e-25 41
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 5e-25 41
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 5e-25 41
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 5e-25 41
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 5e-25 41
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 1e-33 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 7e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNR_1367 YP_007744759.1 Two-component response regulator KdpE VFG1390 Protein 3e-26 43
XNR_1367 YP_007744759.1 Two-component response regulator KdpE VFG1389 Protein 1e-22 41