Gene Information

Name : L2BAMS3_00757 (L2BAMS3_00757)
Accession : YP_007742268.1
Strain : Chlamydia trachomatis L2b/Ams3
Genome accession: NC_020977
Putative virulence/resistance : Virulence
Product : type III secretion system ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 825632 - 826936 bp
Length : 1305 bp
Strand : -
Note : -

DNA sequence :
ATGACTCATTTACAAGAAGAAACTCTGTTGATCCATCAATGGCGCCCGTATCGAGAATGTGGGATTTTATCACGCATATC
AGGATCTCTTCTGGAAGCTCAAGGGCTCTCCGCATGCTTAGGAGAACTCTGTCAAATTTCTCTATCTCGGTCAGACCCTA
TTCTAGCTGAAGTAATTGGCATTCACAATCGCACGACATTATTACTCGCTCTGACTCCCATATACTATCTTGCCATAGGA
GCCGAAGTAGTTCCCTTACGCAGGCCTGCCTCTCTTCCTCTATCCAACCATCTTTTAGGAAGAGTCCTTGATGGATTCGG
GAACCCTTTAGATGGAGGATCTCAGCTCCCTAAAACGAACCTTTCCCCTCTATTTTCTTCTCCCTCTTCTCCTATGTCGC
GTACTCCGATCCAAGAGGTATTCCCTACAGGTATCCGCGCAATCGACGCCCTCCTTACCATAGGAGAAGGACAACGCGTA
GGCATCTTTTCAGAGCCTGGAGGAGGGAAATCTTCTCTTCTGTCTACGATAGCAAAGGGTTCCCAACAGACAATCAATGT
CATTGCCCTAATAGGAGAACGTGGTCGTGAGGTGCGCGACTATGTCAACCAACACAAAGAAGGCCTAGCCGCTCAACGTA
CCGTTATCATCGCCTCTACCGCTTATGAAACTGCAGCTAGCAAAGTCATTGCAGGCCGCGCAGCAATCACAATCGCAGAA
TATTTTCGAGATCAAGGAGCTCGCGTATTATTTACTATGGATTCCTTATCTAGATGGATAGAATCCCTTCAAGAAGTAGC
GATCGCGAGAGGAGAGACACTATCTACACACCACTATGCTGCATCCGTTTTCCATCATGTTGCAGAGTTCCTAGAACGTG
CTGGGAATAATGATAAAGGATCTATCACATCTTTTTATGCCATTTTGCATTACGCAAACCATCCAGATATTTTTACTGAT
TATGTAAAATCTCTTCTGGATGGGCATTTCTTTCTCTCCCCTCAAGAAAAAAGCTTTTCTTCTCCTCCTATCAATGTATT
AACGAGCCTTTCGCGGTCTTCTCGTCAGTTAGCTCTCCCTCATCATTATGCTGCAGCTCAAGAGCTTCTCTCCTTACTCA
AAGCCTATCATGAAGCTATTGATATCATCCAACTAGGAGCTTATGTCTCAGGACAAGATGCTCACCTCGATAGAGCCATT
CGTTTGCTCCCCTCCGTAAAACAATTTTTATCTCAACCTTATTCTCATTACTCAGCTATTCATGAAACTATTGAACAACT
GTGCCAACTGTTGAAACATGAATAA

Protein sequence :
MTHLQEETLLIHQWRPYRECGILSRISGSLLEAQGLSACLGELCQISLSRSDPILAEVIGIHNRTTLLLALTPIYYLAIG
AEVVPLRRPASLPLSNHLLGRVLDGFGNPLDGGSQLPKTNLSPLFSSPSSPMSRTPIQEVFPTGIRAIDALLTIGEGQRV
GIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTVIIASTAYETAASKVIAGRAAITIAE
YFRDQGARVLFTMDSLSRWIESLQEVAIARGETLSTHHYAASVFHHVAEFLERAGNNDKGSITSFYAILHYANHPDIFTD
YVKSLLDGHFFLSPQEKSFSSPPINVLTSLSRSSRQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQDAHLDRAI
RLLPSVKQFLSQPYSHYSAIHETIEQLCQLLKHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-55 41
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 4e-55 41
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-55 41
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-55 41
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-55 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L2BAMS3_00757 YP_007742268.1 type III secretion system ATPase VFG0515 Protein 2e-55 41