Gene Information

Name : SOTONE4_00603 (SOTONE4_00603)
Accession : YP_007734992.1
Strain : Chlamydia trachomatis E/SotonE4
Genome accession: NC_020969
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 641103 - 642608 bp
Length : 1506 bp
Strand : -
Note : -

DNA sequence :
ATGATGGACGGGAATAAAGGCACTATGCAAGATCTGTTAGATCGGCTTCCCTACTCTTTTTTAAAGAAAAATTATTTGCT
GCCTGTAGAGGATTTAGGCGACAAGATCGTTTTTGCAAGGCATTTGAAAAAAACTCCTTTGGAGGCTTTGGATGAGGTGC
GGTTGATCACGCAAAAACCTCTTTCATTGGTTTCTAAGGAAGAAGCAGAAATTATTCATGGATTGCAAAAGCTATATAGC
GATAAGGACGGGAAAGCTTCCGAGATGCTACAGTCTATGCAGGAAGCTGTAGTGCCTGAATCGGAAATTGATACCACAGA
ACTTCTTGAGAATCAAGAGAACAGTGCTCCTGTAGTGCGGTTACTCAATCTGATTCTTAAGGAAGCTATTGAAGAGCGAG
CCTCGGATATTCATTTTGACCCTGTGGAAGATCTTTTACGTATTCGTTACCGCATAGACGGTGTTCTACACGATCGCCAC
GCTCCCCCGAACCATTTACGAGCCGCTCTTATTACTCGTATTAAAGTGCTTACCAAACTCGATATCGCCGAACACCGACT
GCCTCAAGATGGTCGCATTAAGTTGCAACTAGGAGGACAAGAGATCGATATGCGTGTCAGTACGGTCCCTGTCATTCATG
GAGAGCGGGTAGTGTTGCGCATACTGGATAAGCGCAATGTAATTTTAGATGTACGCGGCTTGTGTATGCCTCCTAAAATG
GAGACCTCCTTTAGAAAAGCGATAGGAGTTCCGGAAGGGATTCTATTAGTAACAGGTCCGACAGGAAGTGGGAAGACGAC
CACTTTATATAGTGTCATACAACACCTTTCAGGTCCTTTTACTAATATCATGACCATAGAAGATCCTCCAGAGTATAAAC
TCCCTGGTGTCGCTCAAATTGCTGTGAAACCTAAAATAGGACTAACCTTTTCTAAAGGACTTCGCCATTTGTTAAGACAA
GATCCAGACGTTTTGATGGTAGGAGAAATCCGGGATCAAGAGACTGCGGAGATTGCCATTCAAGCGGCATTGACGGGGCA
CTTGGTAGTGTCTACTCTTCATACGAATGATGCTGTTTCTGCAATCCCGCGTCTTTTAGACATGGGAGTAGAGCCTTATT
TATTATCCGCAACAATGATAGGGGCTGTCGCTCAACGACTCGTCCGTAGAATTTGTACGCATTGCAAAGAATTCTGTGTG
GCCGATGTGCAAGAACAGGCTTTATTAAGAGCTCTAGGGAAGGATCCTTTCGCTCCTTTATGTAAAGGACGCGGATGTTC
ACAGTGCTTCCGTTCCGGATACAAAGGAAGACAAGGGATCTATGAGTTTGTCGATGTAACCACAACACTCCGTTCTGAAA
TTGCTTTAGGGAGACCTTACCACATTTTACGAGGTGTTGCGGAGCGAGAAGGGTATTGCCCTCTGCTAGAGCATGGAGTA
GAACTGGCTCTTGCTGGGGAGACAACCCTTTCCGAAGTTTTGCGTGTGGCAAAACGGTCAGAATAG

Protein sequence :
MMDGNKGTMQDLLDRLPYSFLKKNYLLPVEDLGDKIVFARHLKKTPLEALDEVRLITQKPLSLVSKEEAEIIHGLQKLYS
DKDGKASEMLQSMQEAVVPESEIDTTELLENQENSAPVVRLLNLILKEAIEERASDIHFDPVEDLLRIRYRIDGVLHDRH
APPNHLRAALITRIKVLTKLDIAEHRLPQDGRIKLQLGGQEIDMRVSTVPVIHGERVVLRILDKRNVILDVRGLCMPPKM
ETSFRKAIGVPEGILLVTGPTGSGKTTTLYSVIQHLSGPFTNIMTIEDPPEYKLPGVAQIAVKPKIGLTFSKGLRHLLRQ
DPDVLMVGEIRDQETAEIAIQAALTGHLVVSTLHTNDAVSAIPRLLDMGVEPYLLSATMIGAVAQRLVRRICTHCKEFCV
ADVQEQALLRALGKDPFAPLCKGRGCSQCFRSGYKGRQGIYEFVDVTTTLRSEIALGRPYHILRGVAEREGYCPLLEHGV
ELALAGETTLSEVLRVAKRSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 1e-94 45
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 8e-95 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SOTONE4_00603 YP_007734992.1 hypothetical protein VFG0182 Protein 3e-93 48
SOTONE4_00603 YP_007734992.1 hypothetical protein VFG1876 Protein 4e-97 46
SOTONE4_00603 YP_007734992.1 hypothetical protein VFG2048 Protein 3e-95 45
SOTONE4_00603 YP_007734992.1 hypothetical protein VFG1880 Protein 3e-76 44
SOTONE4_00603 YP_007734992.1 hypothetical protein VFG0233 Protein 8e-70 44
SOTONE4_00603 YP_007734992.1 hypothetical protein VFG0112 Protein 1e-76 41