Gene Information

Name : SOTONE8_00092 (SOTONE8_00092)
Accession : YP_007726313.1
Strain : Chlamydia trachomatis E/SotonE8
Genome accession: NC_020942
Putative virulence/resistance : Virulence
Product : type III secretion system protein InvA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 103984 - 106110 bp
Length : 2127 bp
Strand : -
Note : -

DNA sequence :
ATGAACAAGCTACTCAACTTTGTCAGTAGAACATTCGGGGGAGATGCGGCCCTGAATATGATAAACAAGTCCAGTGACCT
GATCCTCGCCATGTGGATGTTAGGCGTGGTCTTGATGATCATTTTGCCATTGCCTCCAGCTATGGTGGACTTTATGATCA
CCATTAACTTGGCGATCTCTGTGTTCCTGCTGATGGTTGCCTTGTATATTCCCAGCGCATTACAACTTTCTGTTTTCCCC
TCCTTACTCTTAATCACCACAATGTTCCGATTGGGGATTAACATTTCTTCCTCCCGACAAATTCTCCTTCATGCTTATGC
TGGTCACGTGATCCAAGCCTTCGGAGACTTCGTCGTTGGAGGAAACTATGTCGTTGGATTTATTATCTTCCTAATCATCA
CCATCATTCAGTTTATCGTGGTAACAAAAGGTGCGGAGAGGGTCGCTGAGGTAGCTGCTCGATTCCGATTAGATGCCATG
CCTGGTAAACAGATGGCCATCGATGCCGACCTACGAGCAGGAATGATTGATGCGACACAAGCTCGTGATAAGCGATCTCA
GATTCAGAAAGAAAGTGAACTTTATGGAGCTATGGACGGAGCCATGAAGTTCATTAAGGGAGACGTGATCGCAGGGATTG
TTATCTCCTTGATTAACATCGTAGGAGGATTAGTCATCGGAGTGACCATGAAGGGCATGACGATGGCTCAAGCCGCGCAC
ATCTACACGTTGATTACGATCGGTGACGGGTTAGTTTCTCAAATCCCCTCTCTGTTAATCTCTTTAACAGCTGGTATCGT
AACCACTCGAGTATCTAGTGATAAAGACACTAACCTTGGTAAGGAAATTTCTAGCCAGTTGGTTAAAGAACCTCGGGCAC
TTCTCCTATCTGCAGGCGCAACCTTAGGAATCGGATTCTTCAAAGGTTTCCCTTTATGGTCATTTGCTTTAATGGCCGTT
CTCTTTGCAGTATTAGGTATTCTGTTAATCACTAAGAAAAACTCTCCAGGGAAAAAAGGCGGAGCCAGCTCTACTACTAC
AGTAGGTGCCGCTGATGGAGCTGCGGCTTCAGGAGAAAATTCTGATGATTATGCTCTGACTCTTCCTGTAATTCTTGAAC
TTGGAAAAGATCTTTCTAAACTCATCCAACAACGAACCAAATCGGGGCAAAGTTTTGTGGATGATATGATTCCTAAAATG
CGTCAGGCTCTCTATCAGGATATTGGAATTCGTTATCCAGGAATCCATGTACGTACAGACTCCCCTTCCTTGGAAGGTAA
TGACTATATGATTCTGCTGAATGAGGTTCCCTACGTTCGCGGAAAAATTCTACCAAATCATGTGTTAACAAATGAAGTAG
AAGAAAACTTATCTCGGTATAACTTACCTTTTATTACTTACAAAAATGCTGCAGGATTGCCTTCCACTTGGGTTAGTACA
GATGCTCTCACTATCTTAGAGAAAGCTGCGATTAAATACTGGTCTCCTTTGGAAGTGATTATTCTTCACTTGTCCTACTT
CTTCCATAGAAATTCTCAAGAGTTCTTAGGCATTCAGGAAGTACGCTCTATGATTGAATTTATGGAACGTTCCTTCCCTG
ATCTTGTTAAAGAGGTTACCCGTCTTATTCCTCTACAGAAGCTTACAGAAATCTTTAAGCGTTTAGTTCAAGAACAAATA
TCCATTAAGGATTTACGAACTATTTTGGAATCTTTGAGCGAATGGGCACAGACGGAAAAGGATACAGTATTACTTACTGA
ATATGTGCGCTCTTCCTTGAAACTCTATATCAGCTTCAAGTTCTCTCAAGGGCAATCCGCTATTTCTGTATATCTGCTCG
ATCCTGAAATTGAAGAGATGATCCGCGGAGCAATCAAACAAACTTCTGCAGGATCTTATTTGGCTTTAGATCCAGATTCT
GTAAACCTCATCTTAAAATCTATGCGGATGACTATTACTCCTACACCTCCTGGAGGACAGCCTCCTGTGCTGTTGACAGC
AATTGATGTCAGACGCTATGTACGGAAATTGATAGAGACAGAATTCCCTGATATCGCTGTGATTTCTTACCAAGAAGTTT
TACCTGAAATTAGAATCCAGCCTTTGGGAAGAATTCAAATTTTCTAA

Protein sequence :
MNKLLNFVSRTFGGDAALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQLSVFP
SLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVGGNYVVGFIIFLIITIIQFIVVTKGAERVAEVAARFRLDAM
PGKQMAIDADLRAGMIDATQARDKRSQIQKESELYGAMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAH
IYTLITIGDGLVSQIPSLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFALMAV
LFAVLGILLITKKNSPGKKGGASSTTTVGAADGAAASGENSDDYALTLPVILELGKDLSKLIQQRTKSGQSFVDDMIPKM
RQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEVPYVRGKILPNHVLTNEVEENLSRYNLPFITYKNAAGLPSTWVST
DALTILEKAAIKYWSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRLVQEQI
SIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDPEIEEMIRGAIKQTSAGSYLALDPDS
VNLILKSMRMTITPTPPGGQPPVLLTAIDVRRYVRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssD AAO18050.1 LssD Virulence TTSS locus Protein 4e-140 46
YPO0266 YP_002345347.1 secretion system apparatus protein SsaV Virulence Not named Protein 1e-94 42
escV AFO66414.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 9e-96 41
escV AFO66296.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 9e-96 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SOTONE8_00092 YP_007726313.1 type III secretion system protein InvA VFG2126 Protein 0.0 99
SOTONE8_00092 YP_007726313.1 type III secretion system protein InvA VFG0384 Protein 2e-139 46
SOTONE8_00092 YP_007726313.1 type III secretion system protein InvA VFG0064 Protein 4e-143 46
SOTONE8_00092 YP_007726313.1 type III secretion system protein InvA VFG0198 Protein 2e-129 46