Gene Information

Name : MMALV_05640 (MMALV_05640)
Accession : YP_007713229.1
Strain : Candidatus Methanomethylophilus alvus Mx1201
Genome accession: NC_020913
Putative virulence/resistance : Resistance
Product : D-lactate dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.28
Position : 528332 - 529315 bp
Length : 984 bp
Strand : -
Note : -

DNA sequence :
ATGAAGGTTTTCGTCTACAACTATCGCAGATTCGACGAGGAGAAGTACTTCCAGCAGTATGCGGAGGAGTTCGGTTTCGA
ACTCGGATACACGGAGGAGAGTCCGACCATCGACAACTGCGGACTGGCGGACGGCTGCGATTTCATATCGATCATCACGA
CACCGATCACCCCGGAGATGATGGACCGCTTCAAGGAGGGAGGGGTCCGCATGATATCCACCCGCACCATCGGGTACGAC
CACATAGACATCGCATATGCGAAACGTATCGGGATGACCGTCACCCACATCACATACGACCCGGAAGGCGTCGCCGAATA
TACCGTCATGATGATGCTCATGGCCATACGCAAGGCGAAGAACATCCTGGAACGCGGGAAGGATAACGACTTCACCCTCG
ACGGTCTCATCGGAGGGGAGCTCGGGGACATGTCCGTAGGCATAATCGGGACCGGCAGGATAGGAAGGTCAGTCCTCCGC
GACCTGTCGGGATTCGGATGCAGGCTCTACTACTGCAACAGGAGTCCCAGCGAAGAGGCCGACAGATATGCCGAACGCGT
GGACATGGACGAGCTTCTGGGTATGTGCGACGTGGTGTCTCTGCACCTGGAACTCAACAAGGACACGTTCCACATCATGG
GGCCCGAAGCCATATCCAAGATGAAGAAGGGAGCCCTGATAGTAAACACCGCCCGTGGACCGCTCATCGACACGGACGCC
CTCGCGGCCGGACTGGATTCCGGACAGGTCGGAGGTGCGGCGCTGGATGTGATAGAGGACGAGTTCGGCCTATACTACTA
CGACTGCAGCGGCAGGGAATTGGACAACAAGGCCCTGAAGGTCCTGCGCGGAAGACCGAACGTGCTGATAACCCAGCACA
TGGCGTTCTATTACGAGAACGCCATCCGCGACATGGTCTACAACTCGCTTTACGGCATGAAGATGCTGGCGGACGGAAAG
GAGATACCCTACCGCCTCGCATGA

Protein sequence :
MKVFVYNYRRFDEEKYFQQYAEEFGFELGYTEESPTIDNCGLADGCDFISIITTPITPEMMDRFKEGGVRMISTRTIGYD
HIDIAYAKRIGMTVTHITYDPEGVAEYTVMMMLMAIRKAKNILERGKDNDFTLDGLIGGELGDMSVGIIGTGRIGRSVLR
DLSGFGCRLYYCNRSPSEEADRYAERVDMDELLGMCDVVSLHLELNKDTFHIMGPEAISKMKKGALIVNTARGPLIDTDA
LAAGLDSGQVGGAALDVIEDEFGLYYYDCSGRELDNKALKVLRGRPNVLITQHMAFYYENAIRDMVYNSLYGMKMLADGK
EIPYRLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanHB YP_008394258.1 VanH protein, D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 5e-51 44
EF2295 NP_815952.1 D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 2e-50 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MMALV_05640 YP_007713229.1 D-lactate dehydrogenase NC_014475.1.orf2.gen Protein 8e-52 47
MMALV_05640 YP_007713229.1 D-lactate dehydrogenase NC_005054.2598279.p0 Protein 8e-52 47
MMALV_05640 YP_007713229.1 D-lactate dehydrogenase AF155139.2.orf4.gene Protein 2e-55 43
MMALV_05640 YP_007713229.1 D-lactate dehydrogenase FJ349556.1.orf3.gene Protein 8e-52 43
MMALV_05640 YP_007713229.1 D-lactate dehydrogenase AF310956.2.orf4.gene Protein 4e-51 43
MMALV_05640 YP_007713229.1 D-lactate dehydrogenase U35369.1.gene5.p01 Protein 6e-51 42
MMALV_05640 YP_007713229.1 D-lactate dehydrogenase AF130997.1.orf3.gene Protein 8e-52 42