Gene Information

Name : G655_03565 (G655_03565)
Accession : YP_007707562.1
Strain : Pseudomonas aeruginosa B136-33
Genome accession: NC_020912
Putative virulence/resistance : Virulence
Product : pyochelin biosynthesis protein PchD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 743925 - 745568 bp
Length : 1644 bp
Strand : -
Note : COG1021 Peptide arylation enzymes

DNA sequence :
ATGACTTCCTCGCCCGCCACCCCATCGGCCGTCGACGACGCCCCCGACTGGCCCGCCGCCTTCGTCCGCCGCTATCTCGA
CGCCGGCCACTGGCAGGACCAGAACTTCGCCGAAGCCCTGGCCGCCAGCGCCGCGCGCCATCCGCGGCGGATCGCGCTCT
GCGACGACGACCAGCGGCTCAGCTATGCCGACCTGCTCCAGCGCTGCCGCCGCCTGGCAGCCGGACTGCGCCAGGCCGGC
CTCGCACATGGCGACACGGTAGTGCTGCACCTGCCCAACGGCATCGCCTTCGTCGAGACCTGCTTCGCCCTGTTCCAGCT
CGGCGTACGCCCGGTGCTCGCCCTCCCCGCCCATCGCCAGCATGAGATCAGCGGTTTCTGCCGCTTCGCTGAGGCCAAGG
CCTACATCGGCGCCGAACGGATCGACGGCTTCGACCCACGGCCGATGGCCCGTGAGCTGCTCGCCAGCGGCGCCTGCCGG
ATGGCGCTGATCCACGGCGAGGCCGAGGCGCCGCTGCAAGCGCTGGCACCGCTGTACCAGGCCGACGCGCTGGAAGAATG
CGCCGCCCGCGCCGAGGATATCGCCTGCTTCCAGTTGTCCGGCGGCACCACCGGCACGCCGAAGCTGATTCCCCGGCGTC
ATCGCGAGTATCTCTACAACGTCCGCGCCAGCGCCGAGGTCTGCGGCTTCGACGAGCACACGGTGTACCTCACCGGGTTG
CCGATGGCGCACAACTTCACCCTCTGCTGCCCCGGAGTGATCGGCACGCTGCTGGCCGGCGGCCGCGTGGTGGTCAGCCA
GCGCGCCGATCCCGAGCATTGCTTCGCCCTGATCGCCCGTGAACGGGTCACCCACACCGCCCTGGTACCGCCGCTGGCGA
TGCTCTGGCTGGATGCCCAGGAAAGCCGCCGCGCCGATCTATCCAGCCTGCGTCTGCTCCAGGTCGGCGGTTCCAGGCTC
GGCAGCAGTGCCGCGCAACGCGTCGCACCGGTGCTCGGCTGCCAGTTGCAACAGGTGCTGGGAATGGCCGAGGGGCTGAT
CTGCTACACCCGCCTGGACGATCCGCCCGAACGCGTGCTGCATACCCAGGGCCGGCCGCTGTCGCCGGACGACGAAGTGC
GGGTGGTCGACGCCGAGGGCCGCGAGGTCGGCCCCGGCGAGGTCGGCGAACTGACCGTGCGCGGCCCCTACACCATCCGC
GGCTACTACCGCCTGCCCGAACACAACGCCAAGGCCTTCAGCGCGGACGGCTTCTACCGCACCGGCGACCGGGTCAGCCG
CGACAAGGACGGCTACCTGGTGGTGGAGGGCCGCGACAAGGACCAGATCAACCGCGGCGGCGAGAAGATCGCCGCAGAAG
AGGTGGAGAACCTGCTGATCGCCCATCCGCAGGTGCATGACGCCACCGTCGTGGCGATGCCCGACAGCCTGCTCGGCGAG
CGCACCTGCGCCTTCGTCATCCCGCGCCAGCCGGCGCCCTCGGCGCTGAAGCTGAAGCAATACCTGCACGCCTGCGGGCT
GGCCGCGTTCAAGGTGCCGGACCGCATCGAGCTGGTCCCGACCTTCCCCCAGACCGGCATCGGCAAGATCAGCAAGAAGG
ACCTGCGCGAGCGCCTGCGCCGCGAGCTGGAGGCCCGCGCATGA

Protein sequence :
MTSSPATPSAVDDAPDWPAAFVRRYLDAGHWQDQNFAEALAASAARHPRRIALCDDDQRLSYADLLQRCRRLAAGLRQAG
LAHGDTVVLHLPNGIAFVETCFALFQLGVRPVLALPAHRQHEISGFCRFAEAKAYIGAERIDGFDPRPMARELLASGACR
MALIHGEAEAPLQALAPLYQADALEECAARAEDIACFQLSGGTTGTPKLIPRRHREYLYNVRASAEVCGFDEHTVYLTGL
PMAHNFTLCCPGVIGTLLAGGRVVVSQRADPEHCFALIARERVTHTALVPPLAMLWLDAQESRRADLSSLRLLQVGGSRL
GSSAAQRVAPVLGCQLQQVLGMAEGLICYTRLDDPPERVLHTQGRPLSPDDEVRVVDAEGREVGPGEVGELTVRGPYTIR
GYYRLPEHNAKAFSADGFYRTGDRVSRDKDGYLVVEGRDKDQINRGGEKIAAEEVENLLIAHPQVHDATVVAMPDSLLGE
RTCAFVIPRQPAPSALKLKQYLHACGLAAFKVPDRIELVPTFPQTGIGKISKKDLRERLRRELEARA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 4e-99 51
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 6e-99 51
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 2e-99 51
ybtE CAA21394.1 - Virulence HPI Protein 2e-99 51
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 2e-99 51
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 3e-99 51
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 2e-99 51
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 2e-99 51
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 2e-99 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G655_03565 YP_007707562.1 pyochelin biosynthesis protein PchD VFG0168 Protein 0.0 99
G655_03565 YP_007707562.1 pyochelin biosynthesis protein PchD VFG0932 Protein 1e-100 46
G655_03565 YP_007707562.1 pyochelin biosynthesis protein PchD VFG1817 Protein 4e-82 46