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Name : G655_23480 (G655_23480) Accession : YP_007711534.1 Strain : Pseudomonas aeruginosa B136-33 Genome accession: NC_020912 Putative virulence/resistance : Virulence Product : type IVB pilus formation outer membrane protein Function : - COG functional category : - COG ID : - EC number : - Position : 5152710 - 5154284 bp Length : 1575 bp Strand : + Note : COG4796 Type II secretory pathway, component HofQ DNA sequence : ATGCGCAACACCCGACCGGATCGCCGCGATACGGTGGTTTTCTCCGACAAACCCTGGGTCAGCACGAAGCCCCTGAGCGT TTCGCACACTTTGTCCAGTGACTGTATCGTGACCTGGCGCCCTGCAGGCGCAGCGTCGCTGCAGGAGGCCGCCCAGGAAG TCATCAACCAATGCCACCTGGCGGTCAGTATCACGCCCGACGCGCTGAACCCGGCCGCCTTCGCCCTGCAACCTCAGCAG CGCGCGAGCAACGCCCCGCCACCCATCCAAGGCGGCCAGGACATGGCCACCATGCTGTTTCCTGCCTCCGTCGCCAACGG CATGTCCCTAGGTGCCGGCGGCAGCATGGGGTCGAGCTTCGGGTCCTACGGCCCGCGGTCGCTGTACAATATCAAATGGA ACGGCAAGGTCAGCGGATTCCTCGATCTCATCGCCGCCCGCGCCGGCGTGTCCTGGCGCTACAACCCAACCGAGAAACGG GTCGAGTTCTACTACCTGGACACTCGGACCTTCCGCATCTACGCCTTCGACGACGTCAACACGGTGGACTCCACCGTGCG TTCCGGTATGACGACGGCCGCCGGCATCAGCGGGGATGGCTCCGGATCCACTGGGCAGAATGGCAGCTCCGGCATCAGCG GCGACTCCGGCAGCAAGCAGACCACCAGCTCTGAGCTGAAGACCTCGATCCTCAGCGACATAGAGAACAGCATCAACTCG ATGCTGACGCCGAGCATGGGACGCATGTCGCTGTCGCGTGCCACGGGGACCCTGACCGTCACCGACCGACCAGAGGTCCT CAACCGCGTCCAGCAGTTGGTCAACCGGGAGAACGAGAGCATCACCAAGCAGGTGCTGCTGAACGTCAACGTGCTCTCGG TCGCCCTGACCGACAAGGATCAACTGGGGATCGACTGGAACCTGGTCTACAAGTCGCTCAACAACAAGTGGGGCATCGGC CTGAAGAACACCATGCCGGGCATCGATCAAAGCGCGATCTCCGGCTCCGTGAGCATCCTGGATACCGCCAACAGCGCCTG GGCAGGATCCAAGGCCATGGTCCAGGCGCTGGCCCAGCAGGGCCGCGTCTCGACCGTCCGCTCCCCGTCCGTGACCACGC TCAACCTCCAGTCGGCGCCGATCCAGATCGGCCGCTACGACAGCTACCTGGCCTCCAGCCAGATCTCCAACGTCGCCCAG GTCGGCAGTACCACCTCGCTGATCCCGGGCGCAGTGACCAGCGGCTACAACATGAGCCTGCTGCCGTTCGTGATGGAAAG CGGCGAGATGCTGCTGAAGATCAACATCAACATGACCTCCCGGCCGACGTTCGAAATGCAGACCAGCGGAGACTCCAAAG CCCAGTTCCCGAGCTACGACATCCAGCTGTTCGACCAGAAGGTACGCCTGCGCAGCGGCGAGACCTTGGTGCTCTCCGGC TTCGACCAGACCACCGAGGATACCAACAAGGTCGGCACCGGCGACGCCGGATTCTTCGGCCTTGGCGGCGGGCTGACCCG CAATACCAAACGCGAGGTCATCGTGGTGCTGATCACCCCCGTCGTGCTGGGCTGA Protein sequence : MRNTRPDRRDTVVFSDKPWVSTKPLSVSHTLSSDCIVTWRPAGAASLQEAAQEVINQCHLAVSITPDALNPAAFALQPQQ RASNAPPPIQGGQDMATMLFPASVANGMSLGAGGSMGSSFGSYGPRSLYNIKWNGKVSGFLDLIAARAGVSWRYNPTEKR VEFYYLDTRTFRIYAFDDVNTVDSTVRSGMTTAAGISGDGSGSTGQNGSSGISGDSGSKQTTSSELKTSILSDIENSINS MLTPSMGRMSLSRATGTLTVTDRPEVLNRVQQLVNRENESITKQVLLNVNVLSVALTDKDQLGIDWNLVYKSLNNKWGIG LKNTMPGIDQSAISGSVSILDTANSAWAGSKAMVQALAQQGRVSTVRSPSVTTLNLQSAPIQIGRYDSYLASSQISNVAQ VGSTTSLIPGAVTSGYNMSLLPFVMESGEMLLKININMTSRPTFEMQTSGDSKAQFPSYDIQLFDQKVRLRSGETLVLSG FDQTTEDTNKVGTGDAGFFGLGGGLTRNTKREVIVVLITPVVLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13431.1 | putative PilN | Not tested | PAGI-5 | Protein | 0.0 | 100 |
| pilN2 | AAP84210.1 | PilN2 | Virulence | PAPI-1 | Protein | 0.0 | 99 |
| pilN | CAI36059.1 | type IV pilus protein | Not tested | PPHGI-1 | Protein | 2e-98 | 49 |
