Gene Information

Name : G655_23470 (G655_23470)
Accession : YP_007711532.1
Strain : Pseudomonas aeruginosa B136-33
Genome accession: NC_020912
Putative virulence/resistance : Unknown
Product : DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5149390 - 5151363 bp
Length : 1974 bp
Strand : +
Note : COG0553 Superfamily II DNA/RNA helicases, SNF2 family

DNA sequence :
ATGAACCGTCCACGCCTGGTCAATCGTACCTCCGCGACACCTTCGACGCTTCTGCAGCGGGCTATCTTCGACGGCTACGA
CTTCGGCTTGAAGATCCCCTACATCGCAGGCAGCAACCGCGCGCTGCTGGAGCTGTCCGGCTTCTTCATCAGCGCCCGGG
AGCATCCGTTGCACCGCTACTGGCGGGTCCCCAAAGGCAAGCTGCTGCCTGATCTGGACACTCTGTACAACCGTCTCGCC
GAGCTCGCTGGAGGCCTTCACTCCCAGTCCTGGCGGGAGTTCAGCTCCTTGGTCGAATCCGCGCAGGCCTCGCTTGACCG
ACAGGCCTTCACCTGGGGGATGCTGCTGCGCATCGCGCCCCTGGCCGAGGGCGGCGTCCTACTGTCAGGCGAGTTCCATC
CTGGTGTGGTGACGGTGGCTCGGCGGATGCGCGGGGTGTTCCTGCGCCCATCGAGCTCCTGGCGCATCGACGCCACAACT
GAGCTGCTCCGCAGCAACCTGATCCTGGAGCTTGGCCTCGCCGAGGAACAATTCGAGATCCTGGATACCGTCCAGGAGCT
GCTCAGCGACGGTAGCTTCGCGCCGGCGACCGAGCTGCCCAGCATGAGCATCGGCGGTCCACAGCAGGAACCGGCAGCGC
TATCCCTGGAGGACGAGTCAGCTTGTGACATCTACCTCGCCGCGGTGCCAGAGATCGAGCGCACCGAGTACAGCTCGGCT
GATATCGAGGCGGCGCTTCAGGGCTACTCGCTACTGGCCCACCAGCCTGCCGGCATCGCTCACCTGCTGCAAAGAACCAG
CGCCCTGTTGGCCGACGACATGGGATTGGGCAAGACCCGCCAGGCGGTCATCGCCGCTTCGATCCGAGCGGCGGGCAGGC
CAATTCTGGTCATCACCCTGGCCACCCTGTTGATCAATTGGCAGCGCGAAATCCAGCAGGTCTATCCCTCGGCCACCGTG
GCCATCCAGCAGGACAACCCAGAGACGCAGTGGATCCTGGTCAACTACGAGCAGTTGAGCCCCTTCGTCGCCAACGCTTC
ACGCTTCGCCGTGATGGTCATCGACGAGGCGCAGCGGATGAAGGAACCGACGGCGCAATGCACGCGGCACGGTTTCGACA
TTGCCGCCCAAGTGCCGAACCGCTACCTGCTTACCGGCACGCCGGTGCTCAACCGTGAAACCGAGCTGCACACCCTGCTT
CGCCTCTCAGGCCACCCCATCGGCCAACTGCCGCTGAAAGAGTTCTGCGACCGTTTCGCCGGCAACCCGGAGTTCCGCCA
GAGTCTGCGGGCGGAGCTGGGTGACTGGATGCTGCGCAGGCGCAAAGATGTGCTGCCCAGCCTCAAGGGCAAGCAGCGGC
AGTTGCTGAAGGTGGCCCTCTCCACCGAGGAACGCCAGCAATACGACGTGCTGCGTCTCGAGGACCGACCGGTCTTCGCG
CGACTCGGCGCGCTGCGGCGTTACCTGGAAACGGTGAAGGTTCGCGTGGCGATGGACCTGTTGAGCGAGCTCGACGCCGA
GGACAAGGTGATCCTGTTCTGCGAGTTCAAGCCGACCGTGGCTGCGCTGAAAGAACTCTGCGAGCAGGCCGGGCACGGCT
GCGTCACGCTGGTGGGCAATGACTCGCTCACCAAGCGGCAGAAAGCGATCGATCGCTTCCAGCAGGATCCCGACTGCCGG
GTGTTCATCTGCACCACGGCGGCCGCCGGGACGGGCAACAACCTCACTGCGGCGAACTACGTGTTTTTCCTCGGTCTGCC
CTGGACTCCCGGTCAGCAGGAACAAGCCGAGGACCGCGCGTACCGCAACGGCCAGCTCCGCATGGTGGTGGTGAAGATCC
CACTGGTCGAGGGCACGATCGACGAGCAGCTGTGGCAACTGCTCAACGCGAAACGCCAGGTAGCCCAGGACCTCATCGAG
CCAGAGCAGGTTGACGGAAACCGTGCGCTTTTAGCCGCAAGCCTAACTGGATAA

Protein sequence :
MNRPRLVNRTSATPSTLLQRAIFDGYDFGLKIPYIAGSNRALLELSGFFISAREHPLHRYWRVPKGKLLPDLDTLYNRLA
ELAGGLHSQSWREFSSLVESAQASLDRQAFTWGMLLRIAPLAEGGVLLSGEFHPGVVTVARRMRGVFLRPSSSWRIDATT
ELLRSNLILELGLAEEQFEILDTVQELLSDGSFAPATELPSMSIGGPQQEPAALSLEDESACDIYLAAVPEIERTEYSSA
DIEAALQGYSLLAHQPAGIAHLLQRTSALLADDMGLGKTRQAVIAASIRAAGRPILVITLATLLINWQREIQQVYPSATV
AIQQDNPETQWILVNYEQLSPFVANASRFAVMVIDEAQRMKEPTAQCTRHGFDIAAQVPNRYLLTGTPVLNRETELHTLL
RLSGHPIGQLPLKEFCDRFAGNPEFRQSLRAELGDWMLRRRKDVLPSLKGKQRQLLKVALSTEERQQYDVLRLEDRPVFA
RLGALRRYLETVKVRVAMDLLSELDAEDKVILFCEFKPTVAALKELCEQAGHGCVTLVGNDSLTKRQKAIDRFQQDPDCR
VFICTTAAAGTGNNLTAANYVFFLGLPWTPGQQEQAEDRAYRNGQLRMVVVKIPLVEGTIDEQLWQLLNAKRQVAQDLIE
PEQVDGNRALLAASLTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL089 AAP84214.1 DNA helicase Not tested PAPI-1 Protein 0.0 99
unnamed ABR13433.1 putative DNA helicase Not tested PAGI-5 Protein 0.0 99
pph15 CAI36056.1 superfamily II DNA/RNA helicase Not tested PPHGI-1 Protein 0.0 66