Gene Information

Name : G655_16665 (G655_16665)
Accession : YP_007710173.1
Strain : Pseudomonas aeruginosa B136-33
Genome accession: NC_020912
Putative virulence/resistance : Virulence
Product : type III secretory apparatus protein PcrD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3680974 - 3683094 bp
Length : 2121 bp
Strand : -
Note : COG4789 Type III secretory pathway, component EscV

DNA sequence :
ATGAACGACCTGAGCGGGCTTCTCGGCCGGGTCGGCGAGCGCAAGGACATCCTGCTGGTGGTGTTGCTGCTGGCGGTGGT
GTTCATGATGGTGCTGCCGTTGCCACCGCTGCTGCTGGACATCCTCATCGCCGTCAACATCGCCATCTCCGTGGTCCTGT
TGATGATGTCGGTGTACATCGGCTCGCCGTTGCAGTTCTCGGTGTTCCCGGCGGTGCTGCTGATCACCACGCTGTTCCGC
CTGGCGCTGTCGGTGAGCACCACGCGGATGATCCTGCTGCAGGCCGACGCGGGGCAGATCGTCAACACCTTCGGCAGCTT
CGTGGTCGGCGGCAACCTGGTGGTGGGCATCATCATCTTCCTGATCATCACCATCGTGCAGTTCCTGGTGATCACCAAGG
GTGCCGAGCGGGTCGCCGAGGTCAGCGCGCGCTTTTCCCTGGATGCCATGCCGGGCAAGCAGATGAGCATCGACGGCGAC
ATGCGTGCCGGCGTGATCGATGTCAACGAGGCGCGGGCGCGGCGCGCGGTGATCGAAAAGGAAAGCCAGATGTTCGGCTC
CATGGACGGCGCGATGAAATTCGTCAAGGGCGACGCCATCGCCGGGCTGATCATCATCGTCGTCAACATCCTCGGCGGCA
TCGCCATCGGCGTCACGCAGAAGGGCCTGAGCACCGCCGACGCGCTGCAACTGTACGCGGTGCTGACCGTCGGCGATGGC
ATGGTCTCGCAGGTGCCGGCGTTGCTGATCGCCATCACCGCCGGGATCATCGTCACCCGGGTGTCTTCCGACGAATCGGC
GGACCTCGGCAGCGACATCGGCGAACAGGTGGTGGCGCAGCCCAAGGCGCTGCTGATCGGCGGCCTGTTGCTGGTACTGT
TCGGCCTGATTCCCGGTTTCCCGACCCTGACCTTCCTGGCTCTCGCGCTGCTGGTCGGCGGCGGCGGCTACTTCATGCTC
TGGCGCCAGCGGGCCCAGGCCAGCGCCGGTTCCCGCGACCTGCCGGCGTTGCTCGCGCAGGGCGCCGGAGCGCCATCGGC
CAAGGCGCGTGGCAAGGCTGGCGGCGGCAAGCCGAAGGCCGGGCGTCTCGCCGAGCAGGAAGAATTCGCCCTCACCGTGC
CGTTGCTGATCGACGTCGATGCCAGCCTCCAGGAACGTCTGGAGGCGATGTCGCTGAACGAGGAACTGGTGCGGGTACGA
CGCGCGCTGTACCTGGATTTCGGCGTGCCGTTCCCGGGTATCCACTTGCGCTTCAACGAAGCGATGGGCGATGGCGAATA
CCTGGTGCAGCTACAGGAGGTCCCGGTCGCGCGCGGATGCCTGCGGCCGGGCTGGTTGCTGGTGCGCGAACGCGCCGCGC
AGCTGGAATTGCTCGCGGTCCCCCACGAGCCGGCGGAGCTGCAGGTGCCGGGAGAGGAAGCGAGCTGGGTGGAGCAGGCG
CATCAGGATCGCCTGGAGCGTTCCGGCTGTGCCTGCCTGGGCCTGGAGCAGGTGCTCACCTGGCACCTGTCCCATGTGCT
GCGGGAGTACGCCGAGGATTTCATCGGCATCCAGGAGACGCGCTACCTGCTGGAGCAGATGGAGCAGGGTTACGGCGAGC
TGGTGAAGGAGGCACAGCGGATCGTTCCCCTGCAGCGGATGACCGAGATTCTCCAGCGCCTGGTCGGCGAGGACATCTCG
ATCCGCAACATGCGGGCGATCCTCGAGGCGATGGTGGAGTGGGGGCAGAAGGAGAAGGACGTGGTGCAGCTCACCGAGTA
CATCCGCAGCAGCCTCAAGCGCTACATCTGCTACAAGTACTCCAGCGGCAACAATATCCTTCCCGCCTACCTGCTGGACC
AGGCGGTGGAGGAGCAGATCCGCGGTGGCATCCGCCAGACCAGCGCCGGCAGCTACCTGGCCCTCGACCCGGCGATAACC
CAGGCCTTCCTCGAGCGCGTGCGGCAGACCGTCGGCGATCTCGCGCAGATGCAGAACCGGCCGGTGCTGATCGTTTCCAT
GGATATCCGCCGCTACGTGCGCAAGCTGGTGGAGAGCGACTATGCCGGGCTGCCGGTGCTGTCCTACCAGGAGCTGACCC
AGCAGATCAACATCCAGCCGCTTGGCAGGATCGTGTTGTGA

Protein sequence :
MNDLSGLLGRVGERKDILLVVLLLAVVFMMVLPLPPLLLDILIAVNIAISVVLLMMSVYIGSPLQFSVFPAVLLITTLFR
LALSVSTTRMILLQADAGQIVNTFGSFVVGGNLVVGIIIFLIITIVQFLVITKGAERVAEVSARFSLDAMPGKQMSIDGD
MRAGVIDVNEARARRAVIEKESQMFGSMDGAMKFVKGDAIAGLIIIVVNILGGIAIGVTQKGLSTADALQLYAVLTVGDG
MVSQVPALLIAITAGIIVTRVSSDESADLGSDIGEQVVAQPKALLIGGLLLVLFGLIPGFPTLTFLALALLVGGGGYFML
WRQRAQASAGSRDLPALLAQGAGAPSAKARGKAGGGKPKAGRLAEQEEFALTVPLLIDVDASLQERLEAMSLNEELVRVR
RALYLDFGVPFPGIHLRFNEAMGDGEYLVQLQEVPVARGCLRPGWLLVRERAAQLELLAVPHEPAELQVPGEEASWVEQA
HQDRLERSGCACLGLEQVLTWHLSHVLREYAEDFIGIQETRYLLEQMEQGYGELVKEAQRIVPLQRMTEILQRLVGEDIS
IRNMRAILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKYSSGNNILPAYLLDQAVEEQIRGGIRQTSAGSYLALDPAIT
QAFLERVRQTVGDLAQMQNRPVLIVSMDIRRYVRKLVESDYAGLPVLSYQELTQQINIQPLGRIVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssD AAO18050.1 LssD Virulence TTSS locus Protein 0.0 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G655_16665 YP_007710173.1 type III secretory apparatus protein PcrD VFG0198 Protein 0.0 99
G655_16665 YP_007710173.1 type III secretory apparatus protein PcrD VFG0384 Protein 0.0 79