|
Name : G655_09090 (G655_09090) Accession : YP_007708665.1 Strain : Pseudomonas aeruginosa B136-33 Genome accession: NC_020912 Putative virulence/resistance : Virulence Product : nucleotide sugar epimerase/dehydratase Function : - COG functional category : - COG ID : - EC number : - Position : 1953543 - 1955405 bp Length : 1863 bp Strand : + Note : COG1086 Predicted nucleoside-diphosphate sugar epimerases DNA sequence : ATGATCGACGTGTTCGGCGAGCATGCATGGCTTTTCATCACTGCGCCGGTCATCGCCATTCCACTATTCATTCGCTTCGG CATGTATCGCGCGGTGATGCGCTATCTCGGTAACGACGCATTGATCGCCATCGCCAAGGCGGTGACCATCTCGGCTCTGG TGCTGTCGCTGGTGGTGTACTGGTATCGTGGCGCGCCGGCGCCGGTGCCGCGTTCCCTGGTGTTCAACTACTGGTGGTTG AGCATGCTGCTGATCGGCGGCTTGCGTCTGGCCATGCGCCAGTATTTCATGGGCGACTGGTACTCTGCTGTGCAGTCGGT ACCATTTCTCAACCGCCAGGATGGCCTGCCCAGGGTGGCTATCTATGGCGCGGGGGCGGCCGGCAACCAGTTGGTTGCGG CGTTGCGTCTCGGTCGGGCGATGCGTCCGGTGGCGTTCATCGATGACGACAAGCAGATCGCCAACCGGGTCATTGCCGGT CTGCGGGTCTATACCGCCAAGCATATCCGCCAGATGATCGACGAGACGGGCGCGCAGGAGGTTCTCCTGGCGATTCCTTC CGCCACTCGGGCCCGGCGCCGAGAGATTCTCGAGTCCCTGGAGCCGTTCCCGCTGCACGTGCGCAGCATGCCCGGCTTCA TGGACCTGGCCAGCGGCCGGGTCAAGGTGGATGACCTGCAGGAGGTGGACATCGCTGACCTGCTGGGGCGCGACAGCGTC GCACCGCGCAAGGAGCTGCTGGAACGGTGCATCCGCGGTCAGGTGGTGATGGTGACCGGGGCGGGCGGCTCTATCGGTTC GGAACTCTGTCGGCAGATCATGAGTTGTTCGCCTAGCGTGCTGATCCTGTTCGAACACAGCGAATACAACCTCTATAGCA TCCATCAGGAACTGGAGCGTCGGATCAAGCGCGAGTCGCTTTCGGTGAACCTGTTGCCGATCCTCGGTTCGGTGCGCAAT CCCGAGCGCCTGGTGGACGTGATGCGTACCTGGAAGGTCAATACCGTCTACCATGCGGCGGCCTACAAGCATGTGCCGAT CGTCGAGCACAACATCGCCGAGGGCGTTCTCAACAACGTGATAGGCACCTTGCATGCGGTGCAGGCCGCGGTGCAGGTCG GCGTGCAGAACTTCGTGCTGATTTCCACCGACAAGGCGGTGCGACCGACCAATGTGATGGGCAGCACCAAGCGCCTGGCG GAGATGGTCCTTCAGGCGCTCAGCAACGAATCGGCGCCGGTGCTGTTCGGCGACCGGAAGGACGTGCATCACGTCAACAA GACCCGTTTCACCATGGTCCGCTTCGGCAACGTCCTCGGTTCGTCCGGCTCGGTCATTCCGCTGTTCCGCGAGCAGATCA AGCGCGGCGGCCCGGTGACGGTCACCCACCCGAGCATCACCCGTTACTTCATGACCATTCCCGAGGCGGCGCAGTTGGTC ATCCAGGCCGGTTCGATGGGGCAGGGCGGAGATGTATTCGTGCTGGACATGGGGCCGCCGGTGAAGATCCTGGAGCTCGC CGAGAAGATGATCCACCTGTCCGGCCTGAGCGTGCGTTCCGAGCGTTCGCCCCATGGTGACATCGCCATCGAGTTCAGTG GCCTGCGTCCTGGCGAGAAGCTCTACGAAGAGCTGCTGATCGGTGACAACGTGAATCCCACCGACCATCCGATGATCATG CGGGCCAACGAGGAACACCTGAGCTGGGAGGCCTTCAAGGTCGTGCTGGAGCAGTTGCTGGCCGCCGTGGAGAAGGACGA CTACTCGCGGGTTCGCCAGTTGCTGCGGGAAACCGTCAGCGGCTATGCGCCTGACGGTGAAATCGTCGACTGGATCTATC GCCAGAGGCGGCGAGAACCCTGA Protein sequence : MIDVFGEHAWLFITAPVIAIPLFIRFGMYRAVMRYLGNDALIAIAKAVTISALVLSLVVYWYRGAPAPVPRSLVFNYWWL SMLLIGGLRLAMRQYFMGDWYSAVQSVPFLNRQDGLPRVAIYGAGAAGNQLVAALRLGRAMRPVAFIDDDKQIANRVIAG LRVYTAKHIRQMIDETGAQEVLLAIPSATRARRREILESLEPFPLHVRSMPGFMDLASGRVKVDDLQEVDIADLLGRDSV APRKELLERCIRGQVVMVTGAGGSIGSELCRQIMSCSPSVLILFEHSEYNLYSIHQELERRIKRESLSVNLLPILGSVRN PERLVDVMRTWKVNTVYHAAAYKHVPIVEHNIAEGVLNNVIGTLHAVQAAVQVGVQNFVLISTDKAVRPTNVMGSTKRLA EMVLQALSNESAPVLFGDRKDVHHVNKTRFTMVRFGNVLGSSGSVIPLFREQIKRGGPVTVTHPSITRYFMTIPEAAQLV IQAGSMGQGGDVFVLDMGPPVKILELAEKMIHLSGLSVRSERSPHGDIAIEFSGLRPGEKLYEELLIGDNVNPTDHPMIM RANEEHLSWEAFKVVLEQLLAAVEKDDYSRVRQLLRETVSGYAPDGEIVDWIYRQRRREP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-85 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-81 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| G655_09090 | YP_007708665.1 | nucleotide sugar epimerase/dehydratase | VFG0029 | Protein | 2e-117 | 48 |
