|
Name : kdsD (OAN307_c46410) Accession : YP_007706624.1 Strain : Octadecabacter antarcticus 307 Genome accession: NC_020911 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase KdsD Function : - COG functional category : - COG ID : - EC number : 5.3.1.13 Position : 4565752 - 4566720 bp Length : 969 bp Strand : + Note : - DNA sequence : ATGGCACATGATCCGAAATTCACCGAGACCGCCCGCCGTGTAATCCGAGCAGAGGCAGATGCGCTGATCGCATTGGCTGA TGCTATTGATGGCAGCCTTGCGGATGCGGTCGACCTAATCCTGAATGCCAAGGGCCGGATCATCATTTCCGGGATTGGAA AATCTGGCCACATTGCCCGTAAGATCGCAGCGACTTTGGCCAGCACAGGAACGCCTGCGCACTTTGTTCACCCCGCCGAA GCATCGCACGGCGACCTTGGTATGGTCACACGCGGCGATGTGGTTCTGGCGATCAGTAATTCTGGCGAAGCGCCCGAACT TGCCAATCTCATCGCCTATACCCAGCGGTTCGCCATTCCTTTGATCGGTATGACCAGCCGCGCCGAAAGCTCGCTGGCAT CACAATCCGATATCGTTCTGCTGATGCCGAAACTGCCCGAAGCCTGCGGCACTGGCGTGGTTCCGACGACATCCACCACG ATGACACTGGCGCTGGGTGATGCCCTTTGCGTCGCTATCATGGAACACCGCGCCTTCACGCCCGACAACTTTCGTGACTT CCACCCGGGCGGCAAACTCGGTGCGCAACTGTCGCGCGTTGGCGACCTAATGCATAAAGACGACGCCATCCCATTGGTTG GTGAAAGAACCCCGATGAGCGACACCCTGCTGACGATCAGTCAAAAGGGATTCGGTGTGGTTGGTGTTCTAGACGACAAT GGCTACATCGCAGGTATCGTGACCGACGGCGACTTGCGTCGAAATATGGCTGGGTTGTTGGAATTGACTGCGGGCGAAGT GATGACACGCGCGCCTGGCACAATAGACACGGCATCCCTGGCTGAAGAGGCAGTGAACGTAATGAATGAACGTAAGATTA CCTGTCTGTTTGTGGTCGATACCAAAGGGTCGCGCAAAGTGGCTGGCATTTTGCACATCCATGACTGCCTGCGTGCAGGT ATCGTGTAG Protein sequence : MAHDPKFTETARRVIRAEADALIALADAIDGSLADAVDLILNAKGRIIISGIGKSGHIARKIAATLASTGTPAHFVHPAE ASHGDLGMVTRGDVVLAISNSGEAPELANLIAYTQRFAIPLIGMTSRAESSLASQSDIVLLMPKLPEACGTGVVPTTSTT MTLALGDALCVAIMEHRAFTPDNFRDFHPGGKLGAQLSRVGDLMHKDDAIPLVGERTPMSDTLLTISQKGFGVVGVLDDN GYIAGIVTDGDLRRNMAGLLELTAGEVMTRAPGTIDTASLAEEAVNVMNERKITCLFVVDTKGSRKVAGILHIHDCLRAG IV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 4e-37 | 42 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-37 | 42 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 7e-37 | 42 |
