Gene Information

Name : OAN307_c40840 (OAN307_c40840)
Accession : YP_007706123.1
Strain : Octadecabacter antarcticus 307
Genome accession: NC_020911
Putative virulence/resistance : Unknown
Product : putative IS3-family mobile element
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3995311 - 3995652 bp
Length : 342 bp
Strand : -
Note : associated protein, transposase-like

DNA sequence :
ATGGAACAGACACAAAAGAAGAAGACCTCGAAGCCGTATTCACCTGAGTTCCGCGAGCGTACGGTTCGGCTGCTTATGGA
ACACCGCGATGAATATCAGAGCGAAGCTGCGGCGCTGACGGCGATCGCGGGTAAATTGGGTTGTTCACCGGACAGCCTTC
GCGTTTGGGCCCGTCAGGTCCAGCGCGATGGCGGCGAACGGCCAGAGCCTACCAGCGCTGAGAAGGCGCGGATCAAGGAA
CTTGAGCGTGAGAACCGCGAACTGCGTCAAGCCAATGAGATTTTGCGTAAGGCGTCGGCGTATTTTGCACAGGCGGAGCT
CGACCGCCCGTTTCGCAAATGA

Protein sequence :
MEQTQKKKTSKPYSPEFRERTVRLLMEHRDEYQSEAAALTAIAGKLGCSPDSLRVWARQVQRDGGERPEPTSAEKARIKE
LERENRELRQANEILRKASAYFAQAELDRPFRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 2e-23 58
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 7e-22 58
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 2e-23 58
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-22 58
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 5e-22 58
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 2e-23 58
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 7e-22 58
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 5e-22 58
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 3e-24 57
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 2e-24 57
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 2e-24 57
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 3e-21 57
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 2e-24 57
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 2e-24 57
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 6e-24 57
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 6e-24 57
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 6e-24 57
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 6e-24 57
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 7e-22 56
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 1e-20 56
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-22 56
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 9e-21 56
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-22 56
unnamed AAF09023.1 unknown Not tested SHI-O Protein 5e-22 56
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-22 56
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 5e-22 56
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 7e-22 56
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 5e-22 56
SF3706 NP_709445.1 IS629 ORF1 Not tested SHI-2 Protein 7e-21 55
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 9e-20 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OAN307_c40840 YP_007706123.1 putative IS3-family mobile element VFG1717 Protein 2e-22 58
OAN307_c40840 YP_007706123.1 putative IS3-family mobile element VFG1603 Protein 1e-21 57
OAN307_c40840 YP_007706123.1 putative IS3-family mobile element VFG0643 Protein 2e-22 56
OAN307_c40840 YP_007706123.1 putative IS3-family mobile element VFG0606 Protein 2e-21 55