Gene Information

Name : OAN307_c32080 (OAN307_c32080)
Accession : YP_007705364.1
Strain : Octadecabacter antarcticus 307
Genome accession: NC_020911
Putative virulence/resistance : Unknown
Product : IS3-family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3168401 - 3169258 bp
Length : 858 bp
Strand : +
Note : -

DNA sequence :
GTGAGGTTTGCTTTCATCGACGTCTGGAAAGAAGAATGGCCAGTTGAGTTTCTGTGCCGCGTTATGCGGGTCACATCACG
TGGTTTCCGCGCGTGGCGGGTTCGCCCGATGAGCCAGCGACAACGAGATGATATGGTGATCCTAGCTCATATCCGTGAAC
AGCATCGCTTAAGCCTGCAAAGCTATGGGCGGCCTCGGATGACCGAGGAACTGCAAGAATTGGGATTGAAGGTGGGCCAT
CGTAGGGTCGGACGTCTGATGGGCGAGAATGGCATCAAGATCATCAGAACCCAGAAGTACAAGGCGACAACGGACAGCAA
CCACACGTTCAACATCGCACCAAATCTGTTGGATCAAGATTTCTCAGCGACTGGCCCCAATCAGAAATGGGCTGGCGACA
TCAGCTACATCTGGACAAGTGAGGGCTGGCTGTATCTTGCCGTCATCCTTGACCTGTATTCTCGCCGCGTCATCGGCTGG
GCTGTCAGTAACCGCATGAAGAAGGATCTGGCAATCCGGGCGTTAGATATGGCCGTTGCTTTGCGCCAACCACCGGAGGA
TTGCATTCACCATACGGATCGTGGTTCGCAATATTGCTCAAATGAGTATCAGAAGCGCCTGTCCAAGCACGGCTTCAAGA
TCTCGATGAGCGGCAAGGGAAATTGTTATGATAACTCTATGGTTGAGACGTTCTTTAAATCCATCAAGGCTGAGCTGATC
TGGCGTAACCGATGGGATACACGCCGTCAGGCAGAAGGTGCTATATTCCAGTATATCAACGGATTTTACAATCCAAGGCG
CAGGCACTCGTCGCTAGGTGGTAAAAGCCCCTTGGCATTTGAACGAAAGGCCGCATAA

Protein sequence :
MRFAFIDVWKEEWPVEFLCRVMRVTSRGFRAWRVRPMSQRQRDDMVILAHIREQHRLSLQSYGRPRMTEELQELGLKVGH
RRVGRLMGENGIKIIRTQKYKATTDSNHTFNIAPNLLDQDFSATGPNQKWAGDISYIWTSEGWLYLAVILDLYSRRVIGW
AVSNRMKKDLAIRALDMAVALRQPPEDCIHHTDRGSQYCSNEYQKRLSKHGFKISMSGKGNCYDNSMVETFFKSIKAELI
WRNRWDTRRQAEGAIFQYINGFYNPRRRHSSLGGKSPLAFERKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 4e-96 71
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 4e-96 71
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 4e-96 71
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 4e-50 44
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-50 44
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 3e-50 44
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-51 44
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 6e-50 43
unnamed AAF09030.1 unknown Not tested SHI-O Protein 6e-50 43
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 6e-50 43
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 1e-49 43
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 1e-49 43
unnamed AAF09022.1 unknown Not tested SHI-O Protein 3e-50 43
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 8e-50 43
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 3e-49 43
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 6e-50 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OAN307_c32080 YP_007705364.1 IS3-family transposase VFG1631 Protein 1e-51 44
OAN307_c32080 YP_007705364.1 IS3-family transposase VFG1706 Protein 4e-50 43