Gene Information

Name : fliP (OAN307_c29510)
Accession : YP_007705135.1
Strain : Octadecabacter antarcticus 307
Genome accession: NC_020911
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2943100 - 2943876 bp
Length : 777 bp
Strand : -
Note : -

DNA sequence :
ATGAATAGGGTTTTGTCGCAAAGATCGTTCTTATTCTGGATTTGCGTCATCCTTGCGTTTTGCATCGTACCATTTGGCAG
TGTTTATGCGCAGGATGGTGGTGGCCTGCCCGCTTTGAACATCTCTACAGGCGCGGATGGAGAAACAACATATTCACTAT
CTTTGCAGATCCTTGCACTAATGACAGTACTGACGATTCTACCATCTTTCCTGTTGGGGGTAACTGCATTCACCAGGATT
ATTATTGTTTTGTCCATTTTGCGTCAGGCTTTGGGCACTCAACAAACTCCGCCCAATCAGGTCCTACTTTCCATAGCACT
GTTTCTAACGTTCTACGTTATGGCGCCGACGTTCGAGGATATCTACAACAATGCGATCTCGCCCTACCTCGCTGGAGACT
TGCCCCCAGTTGCGGCGATCGAGGGCGCTGCAGGTATACTGAGCGAATTCTTAGTAGTTAATACAAGAGAGGCCGAATTG
GCCATGTTTGCGGAAATGGCGGGCGATGAGCCTTATGCTTCCAACGAAGATGTCCCCTATACCGTTCTGCTGCCTGCTTT
TATCACCTCCGAGCTTAAAACCGCGTTCCAGATCGGTTTTTTGCTGTTTCTCCCGTTTCTCGTGATAGACTTAGTTATTG
CGTCGATCCTGATGTCCCTCGGGATGATGATGCTGAGCCCTATGCTCGTTGCTCTCCCATTCAAACTGCTCCTTTTCGTG
CTCGTAGATGGTTGGGCCATGACCATCGGCTCCATAGCATCGACTTATGTGATCTAA

Protein sequence :
MNRVLSQRSFLFWICVILAFCIVPFGSVYAQDGGGLPALNISTGADGETTYSLSLQILALMTVLTILPSFLLGVTAFTRI
IIVLSILRQALGTQQTPPNQVLLSIALFLTFYVMAPTFEDIYNNAISPYLAGDLPPVAAIEGAAGILSEFLVVNTREAEL
AMFAEMAGDEPYASNEDVPYTVLLPAFITSELKTAFQIGFLLFLPFLVIDLVIASILMSLGMMMLSPMLVALPFKLLLFV
LVDGWAMTIGSIASTYVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 2e-25 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 2e-25 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 2e-25 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 2e-25 41
escR AAL57527.1 EscR Virulence LEE Protein 1e-22 41
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 2e-22 41
escR CAC81847.1 EscR protein Virulence LEE II Protein 1e-22 41
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 2e-22 41
escR CAI43889.1 EscR protein Virulence LEE Protein 1e-22 41
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 8e-23 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 8e-23 41
escR AAC31528.1 L0049 Virulence LEE Protein 1e-22 41
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 7e-22 41
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 1e-22 41
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 2e-22 41
escR AAK26700.1 EscR Virulence LEE Protein 1e-22 41
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 2e-22 41
unnamed AAL06354.1 EscR Virulence LEE Protein 8e-23 41
lscR AAO18040.1 LscR Virulence TTSS locus Protein 2e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_007705135.1 flagellar biosynthetic protein FliP VFG2494 Protein 1e-52 55
fliP YP_007705135.1 flagellar biosynthetic protein FliP VFG2016 Protein 2e-52 53
fliP YP_007705135.1 flagellar biosynthetic protein FliP VFG1259 Protein 2e-53 52
fliP YP_007705135.1 flagellar biosynthetic protein FliP VFG2338 Protein 8e-48 51
fliP YP_007705135.1 flagellar biosynthetic protein FliP VFG0394 Protein 5e-24 42
fliP YP_007705135.1 flagellar biosynthetic protein FliP VFG0827 Protein 7e-23 41
fliP YP_007705135.1 flagellar biosynthetic protein FliP VFG0188 Protein 5e-23 41