Gene Information

Name : OAN307_c19380 (OAN307_c19380)
Accession : YP_007704221.1
Strain : Octadecabacter antarcticus 307
Genome accession: NC_020911
Putative virulence/resistance : Virulence
Product : putative DNA helicase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1918772 - 1922203 bp
Length : 3432 bp
Strand : -
Note : -

DNA sequence :
ATGTCGCCCCAATTGATGAAAGTTTTACGGTACTGGCGTGCCTCTTTAGCAGATGGCGTCTTGGGCAAAGGACAGTTCAG
TCATAGGGATCGAGCTAAATATATCTCATTGCCTGCCGAGGTGTTAAAAAGCGGCATGCTGCCGCAGAACCTCGTTGAGC
GAATTTTCTCTGGCCAGGATGAGAAAGTAAAGGAGGTTTCGGTGCGGTTTTGGCCGCTCGTGACAGCGCGCAGGACATCA
CATGCGGCGCAGACTGCCTCTCGCCTTCCAGAACTTGTGGCGCCAGTAGTAACCGAAGCCAAAGTATGGCGAGACGGGAC
GATCAACCCAATACAGAACGCTATTGCAAGGGATGTTCTGACACCGTTGCCTCAAGGAGAGTTTTCCGTCGGTACTGTTG
AGGCGCTAGATAACTTCCTAACTGTGTCGCCACTTGTTGAGTCTATGAATGTTGATGCTTGGCAAGAATATCTCTCTCAT
TGCCGCAAGATGATCGATGCTGTGGCAAGCGGCTGGCCGAGCAATGACGCTAATTATGACCCGATCGGCTCTGGTTTAAT
GGAAGTCGCTAGGACTGCATCTGCTACCGTGCGCCAAATCCTCGACCTCTATGACCTGTTATTGGACGAAGAACCTGACG
TGCCGCTACTGGCACAATTAGCTTTGCCAGATTCATCGAAAAAGGCCAGCAGCCACGCACGCACTGGTGGGTTCACCAAT
CCACTTGGGCATTCAAACGACCAGTTCCCGATGGCCGATCAGCAGCGAGACGTGCTAGTTCACCTTGCGAACGCGGGCTC
CAGCCAGATACTGGCGGTAAATGGACCTCCAGGTACAGGCAAGACAACGATGCTGTTGTCGGCGATTGCCGGGCAATGGG
TGCAGGCAGCACTAGCCGACGGAATGCCGCCGGTAATTGTGGCTGCGTCGTCCAACAACCAGGCCGTGACGAACATTATC
GACGCGTTTGGTAAGGATTTCGCACTTGGTGAGGGGCCATTTTCTGGCCGTTGGCTGCCAGATCTGAAAAGTTTTGGTAT
GTTTCTCGCATCATTTTCGCGCGAAGCGATTGCAACGAAAACCTATCAAACTGAAACCTTCTTTAACGGCATTGAAAGCG
AAGACTATGTGATGCGGGCTAAAGGGGCTTATCTGACTGCTGCACAACAGGCGTTCCCAAGCTTGGACGACCCGGATGTG
GAAGGTGTGGTCGCAGCGCTACGCGGCTTGATGCAGAAAGAAGTCTTCAAACTGTCGGGCATCGATGAAGCGCGTACAGA
TCTAGAACGACATCAAACCGCAGCGTCTCAAGAGCTCGGCAACGACCCCACGTCTTTCGTGGACGGCCTAACTAAGACGG
AAGCACAATGTGTTGTCGCTCACGAGGATCTGTCCGGACAGATGAAGGCATGGGACAGACATCAAGCATCAGAATCTGGC
CTCTTGGCTTTTTTTGGCTTTTTTCCATCCATCGCCCGAAAGAGGCATCTGCGCGCACGCGTTGCTCTTGAGGATGCGGG
TTGTGAGTTGAACCTATCGAAGAGCAGAAGTCTTGCTGACATCGATATAACTCTTCGCGCAGCAGTTAAGGCCGGGAGCA
AGGCAAGACACAAAGCCAGTAGCGAGCTTGCGCACGCAGTCCGGCTTCTTGATGTGCTCCGTGCTTCAGAGCAGAAATGG
GAAAAGGCAGTTTCGGATCTAGGGGCTCAGCCCTCGCCAGTTTCAGACCTCCAAGACCTTCAGCGTTTCGCAGATTGCAA
TATCCGCTTCCGTCTTTTCCTGCTGGCGACCCATTATTGGGAAGGGCGATGGTTGATGGCCATGGAGGACGATTTACCCG
GAATTGTCCGGGATCAAAAAAAGACGGGGCGAGCAAAAGTTCTACCACGATGGCAGCGGCGGATGATGCTAACCCCTTGT
GCAGTCTCAACGTTTGCAACACTGCCTGGAAAGTTGACGTACTCGACTTTTTCGGGTGGAAATTTCGTAAAGCAGTATCT
CCTGAACTTCATTGATCTGCTAATCGTCGACGAAGCAGGCCAGGTGCTGCCTGAAGTTGCGGCCGCTTCATTCGCCCTCG
CAAAACGAGCATTGGTAATCGGGGATACGCAGCAGATCGAGCCCATATCTTCTGTACCAAAACCAGTGGATATTGGTAAC
CTACAAGACTGTGACCTGCTGCCTCCCACCTTTTCAGAGGAAGATCTCAGCGCGATTTCATCTCGGGGGCTCTGTACAGT
TGGCGGAAGCGCCATGCGGTTGGCGCAGGAAGCATTTGGTGCCAACCCATATCCAGACATGGAGAAGGGCCTTTATCTCT
TTGAACACCGGCGCTGCTACGACGAGATTATTAGTTATTGCAATGCACTATGTTACAAGGGCACATTGCGGCCCAAACGG
GGTGGGGTGCCTGACGAAAATGGATTTCCAGTCATGGGCTACCTACACATCGATGGAATCGCAATCAGCCATGGCGGCAG
CCGCTCCAACCCCGTCGAAGCGCAAACCATTGCCGCTTGGCTGGCCGCAAATCGAGACGATCTCGAAACGCGTTACAGCC
AAAAACTTGAAAAGATAGTCGGAGTAGTCACACCTTTCGGACGACAGGCTGGCGAAATCAGCAACGCTTGTGCCGCACAA
GGTATTCAGGTGGCGGGACGACAGGGGATGACCATCGGCACCGTGCACTCATTGCAAGGCGCAGAACGCGCGGTCGTAAT
TTTCTCCCCTGTGTACTCAAAACATGCTGACGGCCAGTTCATAGACATGTCTCCCAGCATGCTAAATGTGACGGTGTCAC
GAGCAAAGGACAACTTCCTCGTGTTTGGCGATATGGATGTATTCTCGGCCGCACCGATAGGGTCTCCACGGGCCCTACTG
GCAGAATTTCTTTTCAGGTCAGAAGACAACATGCTCGATTTCGAAGTTGCACCTCGAAGGGACTTGGAAGCGGGAAGCCA
GCAATTGCTCACGCTGAGCGACGCGGCCGAACATGATGCATTTATTTTGAAAGCCTTGGCCTCTGGCGGCGAGCATTACA
TGATAGTCAGCCCCTGGGTGATTGTGGCCACGATGAAGCGCGCGGGTCTACTCGAGGCTTTTAGCAGCGCTGTTGCTCGA
GGCGCTACGATCGAAGTTTTTACCGACCCACAACTCAATGAGGCCCGGAAGAAAAATGGCATGAGCAATCTTGAGGCCGC
CGCAGAGATTTTTGCGGACATTGGGGTGACGCTGCACACAGTCCGCCAAGTTCACAGCAAGATATTGGTCATGGACAATG
AACTGTTGTGTATTGGATCTTACAATTGGCTCAGCGCAGATAGGCACGGGAAATATGCCCGCCACGAGACGTCATTCGTA
TACCTTGGCGCGCAATTGCAGGACGAAATCGAGACCATCACTGCAAGTCTCGAAGGAAGAGAAACACACTGA

Protein sequence :
MSPQLMKVLRYWRASLADGVLGKGQFSHRDRAKYISLPAEVLKSGMLPQNLVERIFSGQDEKVKEVSVRFWPLVTARRTS
HAAQTASRLPELVAPVVTEAKVWRDGTINPIQNAIARDVLTPLPQGEFSVGTVEALDNFLTVSPLVESMNVDAWQEYLSH
CRKMIDAVASGWPSNDANYDPIGSGLMEVARTASATVRQILDLYDLLLDEEPDVPLLAQLALPDSSKKASSHARTGGFTN
PLGHSNDQFPMADQQRDVLVHLANAGSSQILAVNGPPGTGKTTMLLSAIAGQWVQAALADGMPPVIVAASSNNQAVTNII
DAFGKDFALGEGPFSGRWLPDLKSFGMFLASFSREAIATKTYQTETFFNGIESEDYVMRAKGAYLTAAQQAFPSLDDPDV
EGVVAALRGLMQKEVFKLSGIDEARTDLERHQTAASQELGNDPTSFVDGLTKTEAQCVVAHEDLSGQMKAWDRHQASESG
LLAFFGFFPSIARKRHLRARVALEDAGCELNLSKSRSLADIDITLRAAVKAGSKARHKASSELAHAVRLLDVLRASEQKW
EKAVSDLGAQPSPVSDLQDLQRFADCNIRFRLFLLATHYWEGRWLMAMEDDLPGIVRDQKKTGRAKVLPRWQRRMMLTPC
AVSTFATLPGKLTYSTFSGGNFVKQYLLNFIDLLIVDEAGQVLPEVAAASFALAKRALVIGDTQQIEPISSVPKPVDIGN
LQDCDLLPPTFSEEDLSAISSRGLCTVGGSAMRLAQEAFGANPYPDMEKGLYLFEHRRCYDEIISYCNALCYKGTLRPKR
GGVPDENGFPVMGYLHIDGIAISHGGSRSNPVEAQTIAAWLAANRDDLETRYSQKLEKIVGVVTPFGRQAGEISNACAAQ
GIQVAGRQGMTIGTVHSLQGAERAVVIFSPVYSKHADGQFIDMSPSMLNVTVSRAKDNFLVFGDMDVFSAAPIGSPRALL
AEFLFRSEDNMLDFEVAPRRDLEAGSQQLLTLSDAAEHDAFILKALASGGEHYMIVSPWVIVATMKRAGLLEAFSSAVAR
GATIEVFTDPQLNEARKKNGMSNLEAAAEIFADIGVTLHTVRQVHSKILVMDNELLCIGSYNWLSADRHGKYARHETSFV
YLGAQLQDEIETITASLEGRETH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2965 NP_708739.1 superfamily I DNA helicase Not tested SHI-1 Protein 0.0 42
unnamed CAD42018.1 hypothetical protein Not tested PAI II 536 Protein 0.0 42
S3169 NP_838460.1 superfamily I DNA helicase Not tested SHI-1 Protein 0.0 42
ORF_2 AAZ04413.1 superfamily I DNA helicase Not tested PAI I APEC-O1 Protein 0.0 42
APECO1_3532 YP_854230.1 superfamily I DNA helicase Not tested PAI I APEC-O1 Protein 0.0 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OAN307_c19380 YP_007704221.1 putative DNA helicase-like protein VFG0627 Protein 0.0 42
OAN307_c19380 YP_007704221.1 putative DNA helicase-like protein VFG1537 Protein 0.0 42