Gene Information

Name : OAN307_c18780 (OAN307_c18780)
Accession : YP_007704164.1
Strain : Octadecabacter antarcticus 307
Genome accession: NC_020911
Putative virulence/resistance : Unknown
Product : IS3-family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1856432 - 1857157 bp
Length : 726 bp
Strand : -
Note : -

DNA sequence :
ATGGTGATCCTAGCTCATATCCGTGAACAGCATCGCTTAAGCCTGCAAAGCTATGGGCGGCCTCGGATGACCGAGGAACT
GCAAGAATTGGGATTGAAGGTGGGCCATCGTAGGGTCGGACGTCTGATGGGCGAGAATGGCATCAAGATCATCAGAACCC
AGAAGTACAAGGCGACAACGGACAGCAACCACACGTTCAACATCGCACCAAATCTGTTGGATCAAGATTTCTCAGCGACT
GGCCCCAATCAGAAATGGGCTGGCGACATCAGCTACATCTGGACAAGTGAGGGCTGGCTGTATCTTGCCGTCATCCTTGA
CCTGTATTCTCGCCGCGTCATCGGCTGGGCTGTCAGTAACCGCATGAAGAAGGATCTGGCAATCCGGGCGTTAGATATGG
CCGTTGCTTTGCGCCAACCACCGGAGGATTGCATTCACCATACGGATCGTGGTTCGCAATATTGCTCAAATGAGTATCAG
AAGCGCCTGTCCAAGCACGGCTTCAAGATCTCGATGAGCGGCAAGGGAAATTGTTATGATAACTCTATGGTTGAGACGTT
CTTTAAATCCATCAAGGCTGAGCTGATCTGGCGTAACCGATGGGATACACGCCGTCAGGCAGAAGGTGCTATATTCCAGT
ATATCAACGGATTTTATAATCCAAGGCGCAGGCACTCGTCGCTAGGTGGTAAAAGCCCCTTGGCATTTGAACGAAAGGCC
GCATAA

Protein sequence :
MVILAHIREQHRLSLQSYGRPRMTEELQELGLKVGHRRVGRLMGENGIKIIRTQKYKATTDSNHTFNIAPNLLDQDFSAT
GPNQKWAGDISYIWTSEGWLYLAVILDLYSRRVIGWAVSNRMKKDLAIRALDMAVALRQPPEDCIHHTDRGSQYCSNEYQ
KRLSKHGFKISMSGKGNCYDNSMVETFFKSIKAELIWRNRWDTRRQAEGAIFQYINGFYNPRRRHSSLGGKSPLAFERKA
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-87 75
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-87 75
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-87 75
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 4e-46 49
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 6e-46 48
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-45 48
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 6e-46 48
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-46 46
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-46 46
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-46 45
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-46 45
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-46 45
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-46 45
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-46 45
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 5e-46 45
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-46 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OAN307_c18780 YP_007704164.1 IS3-family transposase VFG1631 Protein 2e-46 49
OAN307_c18780 YP_007704164.1 IS3-family transposase VFG1706 Protein 7e-47 45