Gene Information

Name : OAN307_c13970 (OAN307_c13970)
Accession : YP_007703710.1
Strain : Octadecabacter antarcticus 307
Genome accession: NC_020911
Putative virulence/resistance : Virulence
Product : metal ion ABC transporter membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1404501 - 1405352 bp
Length : 852 bp
Strand : +
Note : -

DNA sequence : 
ATGGATACCCTTCTTTTACCGTTCCAGTTCGCGTTCATGCAGAACGCGTTTTACATCTCGATGATTGTGTCCGTTCCAAC
GGCCTTATTGTCGTGTTTTCTGGTGATGAAAGGCTGGGCGTTGATGGGTGATGCCGTCAGTCACGCGGTGCTGCCGGGCA
TTGTTCTGGCCTACATCATCGGTATCCCCCTAATCATCGGTGCGTTCATCGCTGGGATGACCTGTGCACTTGCGACTGGT
TACCTGTCCACCAACAGTCGCGTGAAGCAGGACACCGTCATGGGTGTTGTGTTTTCGGGCATGTTTGGTGTTGGCATCGT
GCTGTACGTGTCGGTCGAGACGGCCATGCACCTCGATCATATTCTATTTGGCAACATGCTGGGTGTTGAACCGCACGAGC
TATGGACCGCTGGCATGATCTCTGCGGGCGTTGGTCTGATACTGGCGCTAAAATGGAAGGATTGGTTGCTGCACAGCTTT
GACCCCGCACAGGCACGCGCGTCAGGTCTTTGGGTCAATTGGCTGCACTATGGATTGCTCGCCGCGCTTTCGCTGACCAT
CGTGGCCACTCTATCTGCCGCGGGCCTGATCCTTGCGATTGGTTTACTGATTGCACCGGGTGCCATTGCGTTCTTGGTCG
TGCGCAAATTTTCCACAATGTTATGGGTGTCTGTCATAGTATGTATGGCATCGATGCTATTGGGAACTTATGCCAGTTTC
TTTCTCGACAGTGCGCCTGCGCCAACGATCATTCTCGTTATGACCGCATTGTTTATCGCAGCGTTTATCAGACGTCAGAT
CATCACGCGGCAAGCCTCTATGCAGCGGGTAGATGATGCGGTAAATTCTTGA

Protein sequence : 
MDTLLLPFQFAFMQNAFYISMIVSVPTALLSCFLVMKGWALMGDAVSHAVLPGIVLAYIIGIPLIIGAFIAGMTCALATG
YLSTNSRVKQDTVMGVVFSGMFGVGIVLYVSVETAMHLDHILFGNMLGVEPHELWTAGMISAGVGLILALKWKDWLLHSF
DPAQARASGLWVNWLHYGLLAALSLTIVATLSAAGLILAIGLLIAPGAIAFLVVRKFSTMLWVSVIVCMASMLLGTYASF
FLDSAPAPTIILVMTALFIAAFIRRQIITRQASMQRVDDAVNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-52 61
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-52 61
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-52 61
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-52 61
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-52 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OAN307_c13970 YP_007703710.1 metal ion ABC transporter membrane protein BAC0352 Protein 1e-52 61
OAN307_c13970 YP_007703710.1 metal ion ABC transporter membrane protein BAC0442 Protein 9e-43 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OAN307_c13970 YP_007703710.1 metal ion ABC transporter membrane protein VFG0528 Protein 1e-52 61