Gene Information

Name : OAN307_c13960 (OAN307_c13960)
Accession : YP_007703709.1
Strain : Octadecabacter antarcticus 307
Genome accession: NC_020911
Putative virulence/resistance : Virulence
Product : metal ion ABC transporter membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1403617 - 1404501 bp
Length : 885 bp
Strand : +
Note : -

DNA sequence : 
ATGATGGAATATGTACTTGAACCATTTACCTACGGCTTCATGATCAATGCGATGTGGGTGTCCGCCCTCGTCGGTGGCGT
ATGCGCATTTTTATCCGCATATTTGATGCTCAAAGGCTGGTCTCTGATCGGGGACGCGCTGTCCCATTCGGTCGTTCCGG
GGGTGGCAGGGGCCTATATTCTTGGCCTGCCGTTTGCATTGGGCGCGTTTGTTGCTGGCGCACTGGCGGCGGGTGCGATG
CTATTTTTATCCGAACGGTCAGGCCTGAAGGTCGATGTGATCATCGGGTTGATTTTCACGTCCTTCTTCGGGCTGGGCCT
GTTCATCGTGTCGATCAACCCGATGTCGGTGTCGATCCAGACGATCACTATGGGCAATATTTTGGCCATCACACCGGAAG
ACACGCTACAGTTGGCTATCATCGGGTTTGTGTCGCTGGCCGTGTTGCTGGCCAAATGGAAAGACCTCATGGTCACGTTT
TTTGATGAAAATCACGCGCGCACGATTGGTCTGCGCCCTGGCATGCTCAAGGCGGTTTTCTTCATTTTATTGTCTGCGTC
TGTGGTTGCCGCCATGCAAACCGTCGGTGCGTTTCTAGTAATTGCCTTAGTCGTCACACCCGGGGCCACGGCCTACTTGC
TTTGCGACAGGTTTCCGCGTTTGATAATCACATCCGTCGCCATCGGGTCGATCACCAGTTTCATCGGCGCTTATAGTAGC
TATTTCCTAGATGGCGCGACCGGCGGCATCATCGTGACATTGCAAACCCTTATCTTCCTCGTGGCGTTTGTTTTTGCCCC
CAAGCACGGGTTACTGGCCGCCAAACGCAAAGCCAAACAGGCGCTGGAACGTGGTCCTGGCGATCTAGCAGCGGAGTTTA
AATAA

Protein sequence : 
MMEYVLEPFTYGFMINAMWVSALVGGVCAFLSAYLMLKGWSLIGDALSHSVVPGVAGAYILGLPFALGAFVAGALAAGAM
LFLSERSGLKVDVIIGLIFTSFFGLGLFIVSINPMSVSIQTITMGNILAITPEDTLQLAIIGFVSLAVLLAKWKDLMVTF
FDENHARTIGLRPGMLKAVFFILLSASVVAAMQTVGAFLVIALVVTPGATAYLLCDRFPRLIITSVAIGSITSFIGAYSS
YFLDGATGGIIVTLQTLIFLVAFVFAPKHGLLAAKRKAKQALERGPGDLAAEFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-80 74
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-80 74
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-80 74
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-80 74
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-80 74
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 7e-38 41
sitD NP_461785.1 permease Virulence SPI-1 Protein 9e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OAN307_c13960 YP_007703709.1 metal ion ABC transporter membrane protein BAC0351 Protein 6e-81 74
OAN307_c13960 YP_007703709.1 metal ion ABC transporter membrane protein BAC0441 Protein 8e-69 63
OAN307_c13960 YP_007703709.1 metal ion ABC transporter membrane protein BAC0442 Protein 3e-34 42
OAN307_c13960 YP_007703709.1 metal ion ABC transporter membrane protein BAC0352 Protein 4e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OAN307_c13960 YP_007703709.1 metal ion ABC transporter membrane protein VFG0527 Protein 6e-81 74
OAN307_c13960 YP_007703709.1 metal ion ABC transporter membrane protein VFG0528 Protein 4e-38 41