Gene Information

Name : OAN307_c13940 (OAN307_c13940)
Accession : YP_007703707.1
Strain : Octadecabacter antarcticus 307
Genome accession: NC_020911
Putative virulence/resistance : Virulence
Product : periplasmic metal ion-binding lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1401733 - 1402635 bp
Length : 903 bp
Strand : +
Note : -

DNA sequence : 
ATGCTATCCCGATTTCTAAAAACGACATCTATCGCGGCGATCACTGCGATCTCTGCAACCGGTGCCTTTGCCCAAGACCG
CATGAAGGTTGTGACGACCTTTACGGTCCTTGCGGACATGGCTTCGAACGTTGCGGGCGACGCGGCTGACGTGGTTTCGA
TCACCAAACCGGGCGCTGAAATTCACGGCTACGAGCCGACACCGCAAGACATTGTACGCGCTTCCGACGCCGATCTGATT
TTGTGGAATGGTATGAACTTGGAACTTTGGTTCGAACAGTTCCTCAGCAATATGGACGACGTGCCATCCGCGACGTTGAC
GGATGGTATCGACCCGATTTCGATCTCAGGCGGCAGCTATGAGGGTAAGCCAAATCCGCATGCTTGGATGGGTTTGGACA
ATGCGCTGATCTACATTGACAACATTGTTGCGGCCTTTTCTGAACAAGACCCTGGTAACGCGGAGATTTATGCGGCGAAC
GCCGAAGCATATAAAGAAGAACTGCGTAGCACCATCGAGCCTCTACGTGCTGCCATTGCGGAAATCCCTGAAGAAAACCG
TTGGTTGGTCACATGCGAAGGTGCGTTCAGTTATCTTGCCCGCGATTTCGGCATGAAGGAATTATACCTTTGGCCAATGA
ACGCCGACCAAATGGGGACGCCGCAACAGGTTCGTGCCGTGATCGACGGTGTGAATGATAACGACATTCCCGTCGTGTTC
TGTGAAAGTACTGTCAATACGGCTCCCGCCGAACAGGTGGCCCGTGAAACTGGCGTGGCATACGGTGGCGTGCTCTATGT
AGACAGCCTGAGCGAACCTGATGGCCCAGTGCCAACATACCTTGACCTGCTCAGCGTGACATCGCGCACAGTTGCTAATG
GTCTTACGTCCGCGACAAACTAA

Protein sequence : 
MLSRFLKTTSIAAITAISATGAFAQDRMKVVTTFTVLADMASNVAGDAADVVSITKPGAEIHGYEPTPQDIVRASDADLI
LWNGMNLELWFEQFLSNMDDVPSATLTDGIDPISISGGSYEGKPNPHAWMGLDNALIYIDNIVAAFSEQDPGNAEIYAAN
AEAYKEELRSTIEPLRAAIAEIPEENRWLVTCEGAFSYLARDFGMKELYLWPMNADQMGTPQQVRAVIDGVNDNDIPVVF
CESTVNTAPAEQVARETGVAYGGVLYVDSLSEPDGPVPTYLDLLSVTSRTVANGLTSATN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-80 63
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-80 63
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-80 63
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-80 63
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-80 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OAN307_c13940 YP_007703707.1 periplasmic metal ion-binding lipoprotein BAC0349 Protein 1e-80 63
OAN307_c13940 YP_007703707.1 periplasmic metal ion-binding lipoprotein BAC0439 Protein 6e-78 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OAN307_c13940 YP_007703707.1 periplasmic metal ion-binding lipoprotein VFG0525 Protein 1e-80 63