Gene Information

Name : OAN307_c10200 (OAN307_c10200)
Accession : YP_007703369.1
Strain : Octadecabacter antarcticus 307
Genome accession: NC_020911
Putative virulence/resistance : Unknown
Product : IS3-family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1010710 - 1011519 bp
Length : 810 bp
Strand : +
Note : -

DNA sequence :
GTGCATTTCAGCGGCTTTTATGCATGGCTTAAGGAGCCATTGAGCCAGCGTGCACTTGAAGATGTGCGTCAAACGGATCT
GATCCAGCAGGCCTGGGCAGATAGCGGCAAAGTCTATGGATACCGCAAACTGCATGACGATCTGCGTGACGCGGGTGAGA
CCTGTTCAGAGAACCGTGTGGCGCGTTTGGCCAGCTTGGCAGGTGTCACTGCCCAGATTGGCTACAAACGTCGACCTGCT
CGATATGGCGGCAAGCCAGCGGTGGTCGCTGATAACACACTGGATCGACAGTTTGAGGTTGATATGACCGCTCTCGTTTG
GGTCACTGACATCACCTATATCAAGACGCACGAAGGTTGGTCGTATCTGGCTGTTGTGATTGATCTGTTCTCAAGGCGTG
TGGTTGGGTGGTCGATGCAATCGCGCATGACGACGGACCTCGCCTTGCAGGCCCTGCTGAGTGCTGTTTGGCGGCGCAAG
CCTAAGACCAAAGTAATGGTCCACTCGGGTCAAGGCTCACAATTCACCAGCAAGGAGTGGCAATCGTTCCTCAGCAAACA
CAATTTAGATGCCAGTATGAGCAGACGTGGGAACTGCCATGACAACGCCGTCGCAGAGAGCTTCTTTCAACTGTTGAAAC
GTGAGCGGATCAGGCGGCGGACGTATCTGACGCGCGACGCCGCGAGACAGGACGTGTTCGACTACATCGAGATGTTCTAT
AACCCAAACCGCAAGCATACCAACAACGGCATGCTGTCGCCGGTTAACTATGAAATAAAACAAAGGAAAATGATCAAGGC
AGGTGCCTAG

Protein sequence :
MHFSGFYAWLKEPLSQRALEDVRQTDLIQQAWADSGKVYGYRKLHDDLRDAGETCSENRVARLASLAGVTAQIGYKRRPA
RYGGKPAVVADNTLDRQFEVDMTALVWVTDITYIKTHEGWSYLAVVIDLFSRRVVGWSMQSRMTTDLALQALLSAVWRRK
PKTKVMVHSGQGSQFTSKEWQSFLSKHNLDASMSRRGNCHDNAVAESFFQLLKRERIRRRTYLTRDAARQDVFDYIEMFY
NPNRKHTNNGMLSPVNYEIKQRKMIKAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB CAB61574.1 transposase B Not tested HPI Protein 3e-33 44
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 2e-33 44
tnpA AAD44733.1 TnpA Not tested SHI-2 Protein 4e-31 41
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-34 41
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 4e-35 41
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 9e-35 41
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 1e-26 41
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 1e-26 41
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 6e-28 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-28 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OAN307_c10200 YP_007703369.1 IS3-family transposase VFG1484 Protein 9e-27 41