Gene Information

Name : fliP (OA238_118p0440)
Accession : YP_007702200.1
Strain :
Genome accession: NC_020909
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 39660 - 40343 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence :
GTGGCAGGAGGCTTACCGGCGCTCAACATTTCAACTGGTGAGAATGGCGAAACAACCTATTCATTATCTCTTCAAATTCT
TGCGTTAATGACAGCGATAACAATACTGCCATCAATACTGTTAGGGCTAACAGCATTCACACGAATAATTATTGTTCTCT
CAATTCTTCGACAGGCAATGGGAACACAACAAACTCCTCCCAACCAAGTATTGATTTCTATCGCGCTATTTCTGACCTTT
TATGTCATGGCTCCAACATTTGAAGATATATACAGAAACGCCGCCTTACCTTATTTAGAAGGTTCAGTATCTGCTGTGTC
CGCCATCAGCAGTGCGGCCGATACATTGCGGGAATTCTTGATCTTAAATACAAGAGAGGCAGAGCTGTCCATGTTTGCCG
AGATGGCCGGTGATGAACCTTATGCCACTAATAAAGATGTTCCTTACCCAGTGCTTCTTCCAGCATTTATAACATCTGAA
CTCAAAACGGCCTTTCAAATTGGCTTTCTTCTCTTTCTTCCCTTTCTTGTTATAGATCTGGTTATAGCGTCTATCCTGAT
GTCCTTAGGCATGATGATGTTGAGTCCCATGCTTGTATCTCTACCTTTCAAGTTACTATTGTTTGTCTTAGTGGATGGAT
GGGCGATGACGATCGGATCAATTGCCTCAACGTATGTGAATTAG

Protein sequence :
MAGGLPALNISTGENGETTYSLSLQILALMTAITILPSILLGLTAFTRIIIVLSILRQAMGTQQTPPNQVLISIALFLTF
YVMAPTFEDIYRNAALPYLEGSVSAVSAISSAADTLREFLILNTREAELSMFAEMAGDEPYATNKDVPYPVLLPAFITSE
LKTAFQIGFLLFLPFLVIDLVIASILMSLGMMMLSPMLVSLPFKLLLFVLVDGWAMTIGSIASTYVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 4e-20 42
lscR AAO18040.1 LscR Virulence TTSS locus Protein 5e-21 41
escR AAC31528.1 L0049 Virulence LEE Protein 2e-20 41
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 2e-20 41
escR AAK26700.1 EscR Virulence LEE Protein 2e-20 41
escR AAL57527.1 EscR Virulence LEE Protein 2e-20 41
escR CAC81847.1 EscR protein Virulence LEE II Protein 2e-20 41
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 3e-20 41
escR CAI43889.1 EscR protein Virulence LEE Protein 2e-20 41
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 3e-20 41
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 3e-20 41
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 3e-20 41
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-20 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_007702200.1 flagellar biosynthetic protein VFG2494 Protein 2e-48 55
fliP YP_007702200.1 flagellar biosynthetic protein VFG2016 Protein 1e-49 54
fliP YP_007702200.1 flagellar biosynthetic protein VFG2338 Protein 3e-46 50
fliP YP_007702200.1 flagellar biosynthetic protein VFG1259 Protein 1e-46 50
fliP YP_007702200.1 flagellar biosynthetic protein VFG0188 Protein 1e-20 44
fliP YP_007702200.1 flagellar biosynthetic protein VFG0394 Protein 2e-20 43
fliP YP_007702200.1 flagellar biosynthetic protein VFG0827 Protein 1e-20 41