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Name : kdsD (OA238_c48040) Accession : YP_007702093.1 Strain : Octadecabacter arcticus 238 Genome accession: NC_020908 Putative virulence/resistance : Virulence Product : arabinose5-phosphate isomerase KdsD Function : - COG functional category : - COG ID : - EC number : 5.3.1.13 Position : 5130044 - 5131012 bp Length : 969 bp Strand : - Note : - DNA sequence : ATGGCACATAATCCAAAATTCACCGATACCGCCCGCCGCGTGATCCGCGCTGAAGCAGACGCGCTGATGGCATTGGCCGA TGCGATAGATGGCAGCCTTGCTGATGCCGTCGAGCTAATCCTGAACGCCAAAGGCCGGATCATCATTTCCGGCATCGGAA AATCGGGCCATATTGCTCGGAAAATTGCAGCAACCTTGGCCAGCACGGGGACACCTGCGCACTTCGTTCATCCCGCCGAG GCGTCGCACGGCGACCTTGGGATGGTCACACGGGGCGATGTGGTTCTCGCCATTAGCAATTCCGGCGAAGCGCCTGAGCT CGCCAATCTCATTGCTTATACCCAGCGATTTGCCATCCCATTGATCGGCGTAACCAGCCGCGCCGAAAGCTCACTCGCAT CGCAATCCGACATTGTCCTCTTGATGCCAAAATTGCCTGAGGCCTGCGGCACCGGCGTGGTGCCGACGACATCCACGACG ATGACATTGGCGCTGGGCGACGCGCTTTGCGTGGCGATCATGGAACACCGCGCCTTCACGCCCGACAACTTCCGTGACTT CCACCCGGGCGGCAAACTCGGCGCACAGCTGTCACGCGTTGGCGACCTAATGCATAAAGACGACGCCATCCCGCTGGTTG GCGAAAAAACCCCGATGAGCGATACCCTGCTGACGATCAGTCAAAAGGGATTTGGTGTGGTTGGTGTTCTGGACAACAAT GGCTACCTTGCGGGTATCGTGACCGACGGCGACTTGCGTCGAAATATGGCCGGATTGTTGGACCTGACTGCGGGCGAAGT AATGACACGCGCGCCCGGAACAATTGGTCCCGCATCCTTGGCAGAAGAGGCTGTGAACGTGATGAATGAACGTAAAATCA CCTGTCTGTTTGTGGTCGATCCTAACGGGTCGCGCAAAGTAGTGGGCATTTTACACATCCATGACTGCCTTCGCGCTGGT ATCGTGTAG Protein sequence : MAHNPKFTDTARRVIRAEADALMALADAIDGSLADAVELILNAKGRIIISGIGKSGHIARKIAATLASTGTPAHFVHPAE ASHGDLGMVTRGDVVLAISNSGEAPELANLIAYTQRFAIPLIGVTSRAESSLASQSDIVLLMPKLPEACGTGVVPTTSTT MTLALGDALCVAIMEHRAFTPDNFRDFHPGGKLGAQLSRVGDLMHKDDAIPLVGEKTPMSDTLLTISQKGFGVVGVLDNN GYLAGIVTDGDLRRNMAGLLDLTAGEVMTRAPGTIGPASLAEEAVNVMNERKITCLFVVDPNGSRKVVGILHIHDCLRAG IV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 8e-38 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 5e-38 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-37 | 43 |
