Gene Information

Name : OA238_c47940 (OA238_c47940)
Accession : YP_007702084.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : putative IS3 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5121882 - 5122148 bp
Length : 267 bp
Strand : +
Note : -

DNA sequence :
ATGAAGACAGCACGATTTAGCGACGCACAGATCATGGGCATTTTGAAACAAGCAGAGGGCGGCACGCCGGTCTCTGAGCT
GTGTCGGGAGCATGGGATGAGCAGCGCCAGTTTTTATAAATGGCGGGCCAAATTCGGTGGAATGGATGCATCTTTGATTG
CTGAGATGAAGGACATGTCCGAACAAAACCGGCGGCTCAAGAGGATGTATGCCGAGATGAGCATGCAGAACGATCTGCTG
AAGGAGGCGCTTGGAAAAAAGCGTTAA

Protein sequence :
MKTARFSDAQIMGILKQAEGGTPVSELCREHGMSSASFYKWRAKFGGMDASLIAEMKDMSEQNRRLKRMYAEMSMQNDLL
KEALGKKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 7e-17 54
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 3e-17 54
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 3e-17 54
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 6e-17 52
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 2e-20 45
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-15 42
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 8e-16 42