Gene Information

Name : OA238_c45280 (OA238_c45280)
Accession : YP_007701853.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : IS6 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4829344 - 4830030 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGTCGGTTGATTTCAAGGGAGCCCATTATCCTGAGAGTGTAATCCTGTACGCGGTTTATTTCTATGTGCGATATGGAGT
TTCCTATCGCGACCTGGAAGAAATCATGGAGGAGCGTGGGGCTGAAGTTGACCATGCAACCTTGAACCGTTGGGTGGTTA
AGTTTGGGCCGCTGATGGCGGTACAAGCGCAGTCCCGCAAGAAGCCAACCGCCAAATCTTGGCGCATGGACGAAACCTAC
ATCAAGGTTAAAGGCAAATGGACCTACTATTACCGGGCGGTCGACAACACAGGAAAAACCCTTGATTTCATGCTGTCTGA
GCGTCGCGACAAGGCTGCGGCCCGTCGGTTTTTCAAGCGCGCGATTGGCACGAATGGCGTGCCTGACCGTGTCGTCATCG
ACAAGAGCGGCGCCAATCTGGCGGGTCTGCAAAGCATCAATGTGATCCTGAAGTTCACGGGCTCAGGCAACACCATCAAG
ATCCTGCAGGTCAAATACCTCAACAACATCATTGAACAGGACCATCGCTTCGTAAAGCGGATCACGGCCCCGATGCTTGG
CTTCAAGGCCTTCCATTCTGCCGAGGCGACCTTGGCTGGGATCGAGACCGCGCACATGATCCGAAAAGGGCAGCTCCATG
CCAACGGCCTCACCGCGTTTCAGCAGTTTGCGGAGCTCGCAGCATAA

Protein sequence : 
MSVDFKGAHYPESVILYAVYFYVRYGVSYRDLEEIMEERGAEVDHATLNRWVVKFGPLMAVQAQSRKKPTAKSWRMDETY
IKVKGKWTYYYRAVDNTGKTLDFMLSERRDKAAARRFFKRAIGTNGVPDRVVIDKSGANLAGLQSINVILKFTGSGNTIK
ILQVKYLNNIIEQDHRFVKRITAPMLGFKAFHSAEATLAGIETAHMIRKGQLHANGLTAFQQFAELAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpnIS26 ADZ05778.1 transposase Not tested AbaR12 Protein 1e-31 42
tpnIS26 ADZ05794.1 transposase Not tested AbaR16 Protein 1e-31 42
Pmu_03480 YP_005176246.1 IS26 transposase Not tested ICEPmu1 Protein 2e-31 42
tnpA26 AFV53107.1 transposase of IS26 Not tested AbGRI2-1 Protein 1e-31 42
tnpA AET25383.1 TnpA Not tested PAGI-2(C) Protein 1e-31 42
tnpA26 ACV89831.1 transposase of IS26 Not tested AbaR7 Protein 1e-31 42
tnpA26 ACN81016.1 transposase of IS26 Not tested AbaR5 Protein 2e-31 42
tnpA26 AFV53108.1 transposase of IS26 Not tested AbGRI2-1 Protein 1e-31 42
tnpA AFG30106.1 TnpA Not tested PAGI-2 Protein 1e-31 42
tnp26 AGK36639.1 transposase of IS26 Not tested AbaR26 Protein 1e-31 42
tnpA26 ADK35781.1 transposase of IS26 Not tested AbaR8 Protein 1e-31 42
tnpA26 AFV53110.1 transposase of IS26 Not tested AbGRI2-1 Protein 1e-31 42
tnpA26 AGK07034.1 IS26 transposase Not tested SGI1 Protein 1e-31 42
tpnIS26 ADZ05796.1 transposase Not tested AbaR17 Protein 1e-31 42
tnpA26 AFV53122.1 transposase of IS26 Not tested AbGRI2-1 Protein 1e-31 42
tnpA26 AGK07037.1 IS26 transposase Not tested SGI1 Protein 1e-31 42
tnpA26 ACK44541.1 TnpA Not tested SGI1 Protein 1e-31 42
tpnIS26 ADZ05798.1 transposase Not tested AbaR18 Protein 1e-31 42
Pmu_03450 YP_005176243.1 IS26 transposase Not tested ICEPmu1 Protein 2e-31 42
tnpA26 AGK07039.1 IS26 transposase Not tested SGI1 Protein 1e-31 42
tnpA26 ACK44543.1 TnpA Not tested SGI1 Protein 1e-31 42
tpnIS26 ADZ05810.1 transposase Not tested AbaR20 Protein 1e-31 42
tnpA26 ACN81018.1 transposase of IS26 Not tested AbaR5 Protein 2e-31 42
tnpA26 AGK07092.1 IS26 transposase Not tested SGI1 Protein 1e-31 42
tnpA26 AFV53109.1 transposase of IS26 Not tested AbGRI2-1 Protein 1e-31 42
tpnIS26 ADZ05784.1 transposase Not tested AbaR14 Protein 3e-31 42
tnpA26 ACN81013.1 transposase of IS26 Not tested AbaR5 Protein 2e-31 42
tnpA26 AGK07095.1 IS26 transposase Not tested SGI1 Protein 1e-31 42
tpnIS26 ADZ05788.1 transposase Not tested AbaR15 Protein 1e-31 42
tnp26 AGK36641.1 transposase of IS26 Not tested AbaR26 Protein 1e-31 42
tnpA26 AGK07097.1 IS26 transposase Not tested SGI1 Protein 1e-31 42
tpnIS26 ADZ05800.1 transposase Not tested AbaR19 Protein 1e-31 42
tnpA26 ACV89829.1 transposase of IS26 Not tested AbaR6 Protein 1e-31 42
tnp7109-28 YP_001800928.1 transposase for insertion sequence Not tested Not named Protein 2e-31 42
unnamed AEZ06025.1 TnpA26, Transposase of IS26 Not tested AbaR24 Protein 1e-31 42
tnp7109-29 YP_001800930.1 transposase for insertion sequence Not tested Not named Protein 2e-31 42
ABTW07_3872 YP_005797120.1 transposase of IS15DI, IS6 family Not tested AbaR4e Protein 2e-31 42
ABTW07_3875 YP_005797123.1 transposase of IS15DI, IS6 family Not tested AbaR4e Protein 2e-31 42
ABTW07_3890 YP_005797138.1 transposase of IS15DI, IS6 family Not tested AbaR4e Protein 2e-31 42
IS26 CAJ77078.1 Insertion sequence Not tested AbaR1 Protein 1e-31 42
ABTW07_3906 YP_005797154.1 transposase of IS15DI, IS6 family Not tested AbaR4e Protein 2e-31 42
IS26 CAJ77074.1 Insertion sequence Not tested AbaR1 Protein 1e-31 42
tnpA6100 ACN62081.1 TnpA6100 Not tested SGI1 Protein 4e-30 42
tnpA6100 ACN81001.1 transposase Not tested AbaR5 Protein 6e-30 42
tnpA AAG03007.1 transposase Not tested SGI1 Protein 4e-30 42
tnpA6100 AGK07113.1 IS6100 transposase Not tested SGI1 Protein 4e-30 42
tnp6100 ACS32049.1 Tnp6100 Not tested SGI2 Protein 4e-30 42
CDBH8_0916 YP_005160008.1 transposase-like protein Not tested Not named Protein 6e-30 42
tnp6100 ACX47960.1 tnp6100 Not tested SGI1 Protein 1e-30 42
tnpA6100 AGF34993.1 IS6100 transposase Not tested SGI1 Protein 4e-30 42
tnpA6100 AGK07018.1 IS6100 transposase Not tested SGI1 Protein 1e-30 42
tnpA6100 AGF35032.1 IS6100 transposase Not tested SGI1 Protein 4e-30 42
tnpA6100 AGK07076.1 IS6100 transposase Not tested SGI1 Protein 1e-30 42
tnpA6100 AGF35067.1 IS6100 transposase Not tested SGI1 Protein 4e-30 42
tnpA6100 AGK06937.1 IS6100 transposase Not tested SGI1 Protein 4e-30 42
tnpA6100 AGK06983.1 IS6100 transposase Not tested SGI1 Protein 4e-30 42
tnpA6100 AGK07042.1 IS6100 transposase Not tested SGI1 Protein 4e-30 42
tnpA CAJ77056.1 Transposase Not tested AbaR1 Protein 4e-30 42