Gene Information

Name : OA238_c44970 (OA238_c44970)
Accession : YP_007701828.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 4787244 - 4788680 bp
Length : 1437 bp
Strand : -
Note : -

DNA sequence :
ATGGATCAGAGACAGTTCTACATCAACGGTGCATGGATCGATGCATCTATCGTAAATGATTTCGGCGTGATTGACCCATC
AACGGAAGAGGTCAGTGCAACGATTTCAATCGGGTCGACCGAGGACGCAGACCGCGCAGTGGCAGCAGCGCGTACCGCGT
TTGATGAGTGGTCACAGGCGGCCGTCGAGGCGCGATTAGCGCCGCTCGAAAAGCTTCACGAATTCTATCTGTCACACCGT
GCGGACTTTGCTCGCGCCATGTCGCAAGAGATGGGCGCACCAGTCGATTTTGCTGCAGCGGATCAATTCGAGGCGGGTGC
GTGCCATCTGGAAGAAACCATTCGCGCAGCCAAAGACTTTGCGTTCGAGCAAAAGCGCGGCAAAGACCGCTTGCTCTATC
AGGCCATCGGTGTTGCAGCACTCATCACACCGTGGAACTGGCCGATGAACCAAGTCATTCTCAAGGTCGCACCGGCCCTT
GCCGCGGGATGTACGGTTGTGTTGAAACCGTCCGAACTTGCGCCACTGTCGTCCATGTTGCTGGCTGAATTGATTGATGA
GGCGGGCTTTCCGGCGGGAGTTTTCAACCTCGTCAATGGCGATGGGGCAGGGGTGGGCGCACATTTGTCTGCGCACAATG
ACGTCGACATGGTCAGTTTCACTGGCTCGACACGGGCGGGCATTCTGATTTCGAAAGCCGCTGCAGAAACGATCAAACGG
GTGTCGTTGGAACTGGGCGGAAAAGGCGCAAATATCGTTTTTGAAGATGCGTCCGCTGACGCCATCTCCGATGGGGTTTT
GGGTTGTTTCGGCAATGCGGGCCAGTCTTGCGACGCGCCCACGCGGATGTTGGTGCAGCGGTCGATCTATGATCAAGCTG
TGAAAACGGCGGCGCAAGTGGCGCAGGATCAAAAAGTTGGCTCAGGCCATGAGGCTGGCGATCACATGGGGCCGCTGATC
AGCAAAGACCATTGGGTGAAAGTTCAGGGTTTGATTGAAACGGGCATCGGCGAGGGCGCACGGCTTGTCGCCGGTGGCTT
GGGACGGCCCGACGGCTTGGCCAAAGGATATTTCGCCAAACCCACAGTGTTTGCAGATGTGAACAACCAGATGGAGATTG
CACGCCAGGAGGTGTTCGGTCCGGTTCTGGTGATGATCCCCTTCGATACAGAAGAAGAGGCCATCGCCATCGCCAATGAT
ACGCCTTACGGCCTCGGCAATTACATCCAGACCCAAGACAGCGCTCGCGCGGATCGCGTCGCACGCAGGCTGCGGTCGGG
CATGGTGACGATCAATGGTGACTACCTTGGCGCTGACATGCCGTTCGGAGGGTTTAAGCAATCGGGCAGCGGTCGTGAAG
GATCAGTCTGGGGGTTGGAAGACTTTCTTGAGGTCAAAGCCGTATCAGGAAACACATGGCTACGATTGATCAGATGA

Protein sequence :
MDQRQFYINGAWIDASIVNDFGVIDPSTEEVSATISIGSTEDADRAVAAARTAFDEWSQAAVEARLAPLEKLHEFYLSHR
ADFARAMSQEMGAPVDFAAADQFEAGACHLEETIRAAKDFAFEQKRGKDRLLYQAIGVAALITPWNWPMNQVILKVAPAL
AAGCTVVLKPSELAPLSSMLLAELIDEAGFPAGVFNLVNGDGAGVGAHLSAHNDVDMVSFTGSTRAGILISKAAAETIKR
VSLELGGKGANIVFEDASADAISDGVLGCFGNAGQSCDAPTRMLVQRSIYDQAVKTAAQVAQDQKVGSGHEAGDHMGPLI
SKDHWVKVQGLIETGIGEGARLVAGGLGRPDGLAKGYFAKPTVFADVNNQMEIARQEVFGPVLVMIPFDTEEEAIAIAND
TPYGLGNYIQTQDSARADRVARRLRSGMVTINGDYLGADMPFGGFKQSGSGREGSVWGLEDFLEVKAVSGNTWLRLIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 4e-67 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-50 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OA238_c44970 YP_007701828.1 aldehyde dehydrogenase VFG0082 Protein 1e-50 41