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Name : gabD4 (OA238_c42770) Accession : YP_007701642.1 Strain : Octadecabacter arcticus 238 Genome accession: NC_020908 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase GabD Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 4538341 - 4539795 bp Length : 1455 bp Strand : - Note : - DNA sequence : ATGCTGAAACTTAATGATCCATCTCTCCTTGAGACCCGTGCATTCGTAAATGGTCAATGGATTGAAACCGGAGATACATT TCCAGTCCACAATCCTTCGACTGGCGAAAAGATTGCTGATGTAACTGATTTAGCCATCAGCGATGTCAGCCATGCTATTG ACGGCGCATACGATGCCAAAATCGCGTGGGGAATGAAGACCGGTAAAGAGCGAGGTGCCATTTTACGAAAATGGTACGAT CTGATGGTTGAGAACGTTGACGATCTGGCATCAATCTTAACCGCTGAAATGGGCAAGCCTTTAGCAGAAGCTAAGGGTGA GATCATGTACGGTGCGTCGTACATTGAGTGGTTTGCCGAGGAAGCCAAACGTATTTACGGAGACGTAATTCCGGGCCATC AACCAGACAAACGCATTGTTGTTCTCAAACAGCCAGTAGGTGTCGTGGGTTCCATTACTCCTTGGAATTTTCCGAACGCA ATGATCGCGCGGAAAGTAGCGCCGGCGCTCGCAGTTGGCTGTACCTTTGTTGCTCGCCCTGCAGAGCTGACACCATTGTC AGCCCTTGCAATGGCAGTCTTGGGTGAGCGTGCTGGGATACCGAGCGGTGTTTTCAGTGTTATTACGAGCAGTGACTCTT CCGCTGTTGGTAAAGAACTCTGCGCAAACACGAAAGTTGCCAAAATCACTTTCACCGGCTCAACCCGAGTTGGCAAAATT TTGATGGAACAAGGGGCAGCAACCGTTAAAAAAGTCTCGATGGAGTTGGGGGGAAACGCACCTTTCATTGTGTTCGATGA TGCCGATATCGATGCAGCAGTTGAAGGTGCATTGATTGCAAAGTTCAGAAACGCTGGTCAAACCTGCGTTTGTGCTAACC GGATATATGTACAATCAGGTGTCTATAAAGAGTTCTCCGAGAAGCTGGCCCAACGAGTGGCCGCGTTCATTATTGGCGAT GGTTTTGGGGAAGGGGTCACTGTTGGTCCTCTGATCAATACAGCTGCTTTGGCAAAAATTGAATCTCATCTCTCTGATGC CATTGCAAAGGGTGCTACTCTGGCGACAGGAGGTAAGCGTCATAGTTTGGGCGGGACATTTTTTGAGCCGACCGTCGTCA CAGGCATGAAAAAAAATATGCTCGTTTCTCACGAAGAAACTTTTGGCCCAATAGCACCCTTGTTCGAGTTTGAAACTGAG GATGAAGCAGTCGAACTCGCAAACGACACAGAATTTGGCTTGGCTGGTTACTTCTATTCCAATGACATCAGACGAGTCTG GCGTGTTGCAGAACGGTTAGAGACAGGAATGGTTGGTATCAACACAGGGCTAATATCTACCGAGGTCGCGCCATTTGGCG GTGTCAAACAGTCCGGGCAGGGACGTGAAGGCTCCAAGTACGGTGCCGACGACTATCTTGAGCTAAAATACATGTGCTTT GGCGAGATCAGCTAG Protein sequence : MLKLNDPSLLETRAFVNGQWIETGDTFPVHNPSTGEKIADVTDLAISDVSHAIDGAYDAKIAWGMKTGKERGAILRKWYD LMVENVDDLASILTAEMGKPLAEAKGEIMYGASYIEWFAEEAKRIYGDVIPGHQPDKRIVVLKQPVGVVGSITPWNFPNA MIARKVAPALAVGCTFVARPAELTPLSALAMAVLGERAGIPSGVFSVITSSDSSAVGKELCANTKVAKITFTGSTRVGKI LMEQGAATVKKVSMELGGNAPFIVFDDADIDAAVEGALIAKFRNAGQTCVCANRIYVQSGVYKEFSEKLAQRVAAFIIGD GFGEGVTVGPLINTAALAKIESHLSDAIAKGATLATGGKRHSLGGTFFEPTVVTGMKKNMLVSHEETFGPIAPLFEFETE DEAVELANDTEFGLAGYFYSNDIRRVWRVAERLETGMVGINTGLISTEVAPFGGVKQSGQGREGSKYGADDYLELKYMCF GEIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-139 | 60 |
