Gene Information

Name : OA238_c42410 (OA238_c42410)
Accession : YP_007701607.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : IS6 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4500042 - 4500581 bp
Length : 540 bp
Strand : +
Note : -

DNA sequence :
ATGGTTGATTTTAAAGGCGCGCATTATCCAAAAGGTGTGATCGTCCACGCAGTGTTTTTCTACGTCCGGTATGCCGTCTC
GTACCGCGATCTTGAAGAGATATTGGCAGAGCGTGGTGTGTCCGTCGATCACGCCACCCTGAATCGCTGGGTTGTGAGAT
ATTCACCGTTGATCGCCGCAAAGGCCCAGGCCAAGAAGCGACCAGCAGCCGTTTCCTGGCGGATGGATGAAACTTACATC
AAGGTCAAAGGCAAGTGGACGCACTATTACCGCGCTATCGACCAATTTGGGAAAACTCTTGATTTCATGCTCTCTGAGCA
CCGAGACGAAGCAGCGGCCGCCGCATTCTTCACCCGCGCAATCGGCAACAACGGCTTCCCCGACAGAGTTGTGATCGACA
AAAGTGGGGCAAATCTCGCCGGGTTACAAAACATGAATTGCCTGCTGATTTTGAACGGGTGGTTCTGGTTGATCGAAGTC
CTGCAGGTCAAATATCTTCATAACATAATTGAGCAGATCACCGTTCCATCAAGAAGTTGA

Protein sequence :
MVDFKGAHYPKGVIVHAVFFYVRYAVSYRDLEEILAERGVSVDHATLNRWVVRYSPLIAAKAQAKKRPAAVSWRMDETYI
KVKGKWTHYYRAIDQFGKTLDFMLSEHRDEAAAAAFFTRAIGNNGFPDRVVIDKSGANLAGLQNMNCLLILNGWFWLIEV
LQVKYLHNIIEQITVPSRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp YP_252034.1 transposase for IS431mec Not tested SCCmec Protein 8e-22 44
tnp YP_251940.1 transposase for IS431mec Not tested SCCmec Protein 2e-20 43
ef0041 AAM75240.1 EF0034 Not tested Not named Protein 4e-19 41