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Name : clpB (OA238_c40370) Accession : YP_007701423.1 Strain : Octadecabacter arcticus 238 Genome accession: NC_020908 Putative virulence/resistance : Virulence Product : chaperone protein ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 4281691 - 4284300 bp Length : 2610 bp Strand : - Note : - DNA sequence : ATGAACCTAGAAAAGTTCACAGAACGGTCGCGCGGTTTTATTCAAGCCGCCCAGACGATCGCAATGCGTGAAAGCCATCA ACGGCTTGCCCCTGAACATTTGCTCAAAGCCTTGCTTGATGATGATCAAGGTTTGGCCACGAACCTAATTAACGCGTCCG GCGGTGATGCCGCAGGGGTTTTGCAAAACGTTGATATTGCACTCGCTAAAATGCCCACCGTGACGGGTGACGCGGCGCAA ACATTCATGGATGGAACAACAGGTAAAGTACTGGCCGAGGCTGAAAAGCTCGCCAAGAAAGCTGGCGACAGCTTTGTGCC TGTGGAACGTATCCTGATGGCGCTGACGATGGTTAAATCCAAAGCCAAGGATTCATTGGACGCTGGCAAGGTGACGGCGC AATCGCTCAATTCCGCGATCAACGACATTCGCAAAGGCCGCACGGCTGATACGGCATCGGCCGAAGAAGGCTATGACGCG TTGAAAAAATACGCGATGGATCTGACGGCGCGTGCCCGTGAAGGTAAGATTGACCCGATCATTGGTCGTGACGAAGAAAT CCGTCGCGCGATGCAGGTTTTATCGCGCCGAACAAAGAACAACCCCGTTTTGATCGGTGAACCTGGCGTGGGTAAGACCG CGATTGCCGAAGGTTTGGCACTGCGCATTGTCAACGGGGACGTGCCGGAATCATTGCGCAACAAATCGCTGCTCTCCCTC GACATGGGGGCTTTAATCGCTGGCGCGAAATATCGTGGCGAATTCGAAGAACGCCTCAAGGCCGTGCTGAACGAAGTCAC CGAAGCCGCGGGTGAGGTCATTCTTTTCATCGATGAAATGCACACGCTTGTCGGTGCAGGCAAAGGTGACGGCGCGATGG ACGCCGCAAACCTGATCAAGCCAGCTTTGGCACGGGGCGAATTGCATTGTATTGGCGCAACGACGCTGGATGAATACCGC AAATATGTGGAAAAAGACGCAGCCCTTGCGCGGCGTTTCCAGCCAATTGTTGTGCAGGAACCAACCGTTGAAGACACAAT CAGCATCCTGCGTGGCATCAAAGAAAAGTATGAATTACACCACGGGGTTCGGATTTCTGACAGCGCGCTGGTCGCGGCGG CGACCCTAAGCCATCGTTACATCACTGACCGTTTCTTGCCGGACAAAGCCATCGACCTTATGGACGAAGCTGCGTCGCGG TTGCGCATGGAAGTGGACAGCAAACCAGAAGAACTTGACCAGCTTGACCGCCAAGTCATGCAATTGCAAATCGAAGCCGA AGCCTTGCGCATGGAGGACGATCAGGCATCAAAAGATCGACTTAAGAAGCTTGAGGGTGAGTTGTCGAAGGTGCAGGAGC AATCCGTCAGCATGACAGCAAAGTGGCAGGCGGAACGCGATAAACTCGAAGGGGCGCGTGGGTTGAAGGAAGACCTTGAT CATGCCCGCGCCGAACTGGATATCGCGAAACGTGAAGGCAACCTCGCCAAGGCGGGGGAGCTGTCATACGGCGTCATCCC GCAGCTTGAAAAGCAGTTGGGCGAAGCGGAAGATAACGATCTTATGGTCGAAGAAGCCGTGCGCCCTGAACAGATTGCCA GCGTTGTTGAGCGCTGGACGGGTATCCCGGTTGCCAGAATGCTCGAAGGGGAACGTGAAAAGCTGCTGCGCATGGAAGAT GGTTTGCATAAGCGCGTCATTGGGCAGGACACCGCGGTACGGTCTGTCGCCAATGCAGTGCGTCGTGCGCGGGCTGGCCT GAACGATGAAGGGCGGCCTTTGGGCTCGTTCCTATTCCTCGGGTCAACGGGCGTCGGTAAGACTGAATTGACCAAAGCTG TCGCGGAATTTTTGTTTGATGATGATAACGCGATGGTGCGGCTCGATATGTCGGAGTTTATGGAAAAACATTCGGTGTCG CGTCTTATCGGTGCGCCTCCGGGTTATGTCGGTTACGATGAAGGCGGTGTTTTGACCGAAGCTGTGCGGCGGCGTCCGTA TCAGGTGATCCTGTTTGACGAGGTTGAAAAGGCGCATCCAGACGTGTTCAACGTGCTGTTACAGGTATTGGATGACGGCG TGTTGACGGATGGCCAAGGCCGGACAGCCGATTTCAAACAAACGTTGATCATCCTGACATCCAACCTCGGGTCACAAGCG CTCAGTCAGTTGCCCGAAGGATCGGATATGGTGGACGCCAAGCGCAATGTCATGGATGCGGTGCGGGCACACTTCCGGCC AGAGTTCCTCAATCGTCTCGATGAAACGGTGATCTTTGATCGGTTGGCACGTGACGATATGGACGGCATTGTCACGATCC AGATGTCGCAGCTTTTGAAACGGTTGGCGTCGCGCAAAATCAATCTGGCGTTGGATGACGGTGCGCGCAAATGGCTGGCA GACGAAGGCTATGATCCGGTGTTCGGTGCACGGCCACTAAAGCGTGTCATCCAGCGTGCATTGCAAGATCCGCTCGCAGA AATGCTGCTCGCGCGGGACGTGAAAGACGGTGACACCGTGCCGGTGTCTGCCGGCGCTGACGGGCTGTTGGTAGGGGATC GGATCAGTGTTTCGAACCGCCCGAAGCCTGACGAAGCAGTCGTTCATTAA Protein sequence : MNLEKFTERSRGFIQAAQTIAMRESHQRLAPEHLLKALLDDDQGLATNLINASGGDAAGVLQNVDIALAKMPTVTGDAAQ TFMDGTTGKVLAEAEKLAKKAGDSFVPVERILMALTMVKSKAKDSLDAGKVTAQSLNSAINDIRKGRTADTASAEEGYDA LKKYAMDLTARAREGKIDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLRNKSLLSL DMGALIAGAKYRGEFEERLKAVLNEVTEAAGEVILFIDEMHTLVGAGKGDGAMDAANLIKPALARGELHCIGATTLDEYR KYVEKDAALARRFQPIVVQEPTVEDTISILRGIKEKYELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLMDEAASR LRMEVDSKPEELDQLDRQVMQLQIEAEALRMEDDQASKDRLKKLEGELSKVQEQSVSMTAKWQAERDKLEGARGLKEDLD HARAELDIAKREGNLAKAGELSYGVIPQLEKQLGEAEDNDLMVEEAVRPEQIASVVERWTGIPVARMLEGEREKLLRMED GLHKRVIGQDTAVRSVANAVRRARAGLNDEGRPLGSFLFLGSTGVGKTELTKAVAEFLFDDDNAMVRLDMSEFMEKHSVS RLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTADFKQTLIILTSNLGSQA LSQLPEGSDMVDAKRNVMDAVRAHFRPEFLNRLDETVIFDRLARDDMDGIVTIQMSQLLKRLASRKINLALDDGARKWLA DEGYDPVFGARPLKRVIQRALQDPLAEMLLARDVKDGDTVPVSAGADGLLVGDRISVSNRPKPDEAVVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-157 | 51 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-101 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-101 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-101 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_007701423.1 | chaperone protein ClpB | VFG0079 | Protein | 2e-147 | 44 |
| clpB | YP_007701423.1 | chaperone protein ClpB | VFG2076 | Protein | 1e-121 | 42 |
