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Name : gabD3 (OA238_c35120) Accession : YP_007700940.1 Strain : Octadecabacter arcticus 238 Genome accession: NC_020908 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase GabD Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 3748014 - 3749492 bp Length : 1479 bp Strand : + Note : - DNA sequence : ATGCTTGATTCCACCACAGACCTAAAGTCCATGCTCACCCGTCCCGATCTTTTGTGCACCGACGCCTTTCTCGGCGGTAA ATGGGTGCAGGCCAAAGACGGCAAAACCTTTGATGTCACCAATCCCGCGCGCGGCGACGTGATCGCAAAAGTCGCCGACC TAAGCCGCGCAGAAATCGCGCAAGGCATTGATGCCGCAGAAAAAGCGCGCCACGCATGGGCCAAACGCACCGGCAAAGAC CGCGCCAATGTCATGCGCAAATGGTTCGATCTGATGATGGAAAATCAAGAAGACCTCGCGATCATTATGACCGCCGAACA GGGCAAGCCAATGACGGAATCGCGCGGCGAAATCGCCTATGGCGCGTCTTTCGTGGAATGGTTTGCCGAAGAAGCGAAAC GCAATTACGGCGAAACGATCCCCGGTCATCAGCCCAACCTGCGCCTGACCGTGATCAAGCAGCCCATAGGCGTCGCCGCT GCCATCACCCCGTGGAATTTCCCCAACGCGATGATCGCGCGCAAAGTCGCCCCCGCGCTGGCCGCCGGCTGTGGGTTTGT CGTGCGCCCCGCGTCCCTGACCCCGCTGTCCGCCCTCGCCATGGGCAAATTGGCTGAGGAGGCCGGCATCCCGGAAGGCC TGTTCAGCGTCGTCACCACCACGTCGTCGTCCGAGGCTGGCAAAGAATTCTGCGAAAACCCGCTTGTGCGCAAACTGACC TTCACTGGGTCTACCGAAGTGGGACGCATCCTGCTTAAACAAGCTGCCGATCAAGTGATGAAATGTTCCATGGAACTGGG CGGCAACGCGCCGTTCATCGTGTTTGACGACGCGGACCTCGACGAAGCTGTCAAAGGTGCCATCGCTTGCAAATTCCGCA ACAACGGCCAGACCTGTGTCTGCGCCAACCGCATCTATGTGCAGGCAGGCATCTACGACGATTTCGCTGCAAAACTGAAG ATCGCGGTTGAGGCGCTCAAGATTGGTGATGGGCTGAACGACGACACGCAACTCGGCCCCCTGATCGAAGCCTCCGCCAT CGACAAAGTGCAAGAACACCTGAAAGACGCGCTGTCCAAAGGCGGCACGATCCTGACGGGCGGCAAACCGCATGATCTGG GCGGTCTGTTCTTTCAGCCGACAATCGTAACGGGTGCGACGCAAGACATGATGGTCAGCACGGATGAAACATTCGGCCCC TTCGCGCCGCTGTTCAAATTTGAAGACGAAGACGACGTGATCACCAAAGCCAACGACACCATCTTCGGCCTTGCGAGCTA CTTTTACGCCAAGGACCTCAGCCGCGTCACCAAAGTCGCCGAAGCCTTGGAATACGGCATCGTCGGCGTCAACACCGGCA TCATTTCCACCGAAGTCGCCCCGTTCGGCGGCGTCAAACAATCAGGTCTGGGCCGTGAAGGATCGCGCCACGGCATGGAT GACTACATGGAAATGAAATACATTTGCATGAGCGTTTAA Protein sequence : MLDSTTDLKSMLTRPDLLCTDAFLGGKWVQAKDGKTFDVTNPARGDVIAKVADLSRAEIAQGIDAAEKARHAWAKRTGKD RANVMRKWFDLMMENQEDLAIIMTAEQGKPMTESRGEIAYGASFVEWFAEEAKRNYGETIPGHQPNLRLTVIKQPIGVAA AITPWNFPNAMIARKVAPALAAGCGFVVRPASLTPLSALAMGKLAEEAGIPEGLFSVVTTTSSSEAGKEFCENPLVRKLT FTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDEAVKGAIACKFRNNGQTCVCANRIYVQAGIYDDFAAKLK IAVEALKIGDGLNDDTQLGPLIEASAIDKVQEHLKDALSKGGTILTGGKPHDLGGLFFQPTIVTGATQDMMVSTDETFGP FAPLFKFEDEDDVITKANDTIFGLASYFYAKDLSRVTKVAEALEYGIVGVNTGIISTEVAPFGGVKQSGLGREGSRHGMD DYMEMKYICMSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-147 | 60 |
