Gene Information

Name : OA238_c33110 (OA238_c33110)
Accession : YP_007700751.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : AMP-dependent ligase and ligase-domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3510804 - 3512423 bp
Length : 1620 bp
Strand : +
Note : medium-chain-fatty-acid--CoA ligase-like

DNA sequence :
ATGGGCTGGATGAGGGATGAGACTGGGCTGGATAAGACACCTGCGAACTACGTACCACTCACCCCGTTGAGCCATTTGGC
ACGCGCGGCCAAGGTTTTTCCCGACCGTGAGGCACTGGTCTACGGCGATACGCGCCTGACCTATCGCGATTATCATGCTC
GCGTGTCCCAACTGGCGAGCGCGTTGCAGATAGCGGGCGTTGTTGCGGGCGATGTTGTCTCGACACTGCTGCCCAACATC
CCCGCCCAAGCCGAAGCACATTTTGGCGTGCCTGCGGCGGGGGCTGTGTTGAACACAATCAATATCCGGCTGGACGTGGA
TACAATTGCCTATATTTTCGATCACGGTGAAGCAAAAGTCGTGCTGGTAGACAGCCAGTTCCTGCCGGTCTGTATGCAAG
CAATTGAAGCAATGGAGGGCGCGGCACCGCTGGTTGTTGAAGTCCCCGACCCGATCGCAGGCGTGCCCGAGATCGGTAAG
CAGATCGATTATGAAACATTTCTCGCCGCAGGTGATCCAAACTTTGCATGGGTTTTGCCCGAAGACGAATGGGAGAGCCT
TGCACTTAATTACACGTCAGGCACCACAGGGCAGCCCAAGGGCGTCGTCTATCATCACCGTGGTGCCTATCTGATGACCA
TGGGCACGCCCGTCACGTGGCGCATGACGCTGCATCCGATCTTTTTGACCATCGTGCCGTTGTTTCACTGCAACGGATGG
AACCACACATGGATGATGCCGATGCTGGGTGGCACGGTTGTGTGTTGTCGCGACGTATCAGCGGCGGCGATTTACGCAGC
CATAGCAGATGAAGGTGTCACTCATTTTGGCGGCGCACCGATTGTGCTGAACCTATTGGTAAACGCAAAATCCGAAGACC
GCCGCGATTTCGATCATACTGTCGAAGTGTTTACCGCCGGCGCGCCCCCTGCCCCAGCCACACTGGCGGCGATTGGGGAT
TTGGGGTTCAACGTGCAGCAGGTTTACGGGCTGACCGAAACCTACGGCCACGTCACAGAATGCTTGTGGAATGACAATTG
GGACACGCTGCCCCTCGACAAGCAATCCGCAATCAGGGCCCGCCAAGGCGTTGCGTTCCCGCAGATGGAAGACATTACCG
TGATGTCGGATGCGATGGAACAGGTCGCGATGGACGGAAAAACCCAAGGTGAGATCGTGATCAGGGGCAATTCGGTGATG
AAGGGTTATCTGAAAAATCCGGACGCCACGGCAAAGGCATTCAAAGGCGGCTATTTCCATTCTGAAGATTTGGCCGTGCA
ACACCCTGACGGATCGATGCAGATTGCCGACCGCGCCAAGGACATCATCATTTCCGGCGGGGAGAATATATCCTCCGTTG
AAGTTGAAAATGCATTGATGGGCCATCCCGATGTCATGCTCTGTGCTGTCGTTGCGATGCCGGATGACAAATGGGGCGAA
GTGCCCTGTGCCTTTGTTGAGTTGAAAGTTGGCCACGAGGCTAGCGCGGAGGCGTTGATCTCGTTCACCAAACAACGTCT
CGCCGGATTTAAGTGCCCCAAAAGGATCGTGTTTGGCGAACTGCCCAAAACATCGACAGGAAAAATCCAGAAATTCGAGT
TGCGCAAGACGTTCCGATAA

Protein sequence :
MGWMRDETGLDKTPANYVPLTPLSHLARAAKVFPDREALVYGDTRLTYRDYHARVSQLASALQIAGVVAGDVVSTLLPNI
PAQAEAHFGVPAAGAVLNTINIRLDVDTIAYIFDHGEAKVVLVDSQFLPVCMQAIEAMEGAAPLVVEVPDPIAGVPEIGK
QIDYETFLAAGDPNFAWVLPEDEWESLALNYTSGTTGQPKGVVYHHRGAYLMTMGTPVTWRMTLHPIFLTIVPLFHCNGW
NHTWMMPMLGGTVVCCRDVSAAAIYAAIADEGVTHFGGAPIVLNLLVNAKSEDRRDFDHTVEVFTAGAPPAPATLAAIGD
LGFNVQQVYGLTETYGHVTECLWNDNWDTLPLDKQSAIRARQGVAFPQMEDITVMSDAMEQVAMDGKTQGEIVIRGNSVM
KGYLKNPDATAKAFKGGYFHSEDLAVQHPDGSMQIADRAKDIIISGGENISSVEVENALMGHPDVMLCAVVAMPDDKWGE
VPCAFVELKVGHEASAEALISFTKQRLAGFKCPKRIVFGELPKTSTGKIQKFELRKTFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01500.1 AMP-binding protein domain Not tested PAGI-1 Protein 1e-115 50