Gene Information

Name : OA238_c32760 (OA238_c32760)
Accession : YP_007700719.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : putative integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3473410 - 3474876 bp
Length : 1467 bp
Strand : +
Note : -

DNA sequence :
ATGACCGACAGAAATACCCATAGCCAGCATACCGCGGCTGCGCGCGCCGGCTTTAGTGAGCGAACAGCACGACGCTTTGA
CGCAGATTCAACTCTTCCTTCGCAACGTCAGCCTAAAAGAGTGCGCACAGTTGCAGATCCCCTTGATGGGGTTTGGGAGA
CGCTTCTCTTACCCATCTTGAAACAGGATAGCTCTGTGCAAGCCATTACGTTGCTGCGCCATTTACAGCAGCAATGCCCC
GAGGACTTTCAAGATGACCGCATTCGCCGCACACTTGAGCGTAGGGTGCGGGACTGGCGCGCATTACATGGCCCTGAGAG
GGACATCATTTTCCGTCAGGTTCCCGAACCTGGTTATATGTGTCAGTCAGACTTCACTAATGCTGATGGTTTGGGCATCA
CCGTTGGCGAGAATGCATTTAAGCACCGGCTGTATCATTTTGTGCTTGTTTACAGCCGATGGGAACATGTTGGTGTGGTA
CTGGGTGGCGAAAGCTACACCGCACTTGCCGAAAACCTTCAAAATGCCCTCTGGGCTTTGGGTGGGGCACCCAAAAACTG
TCGGACCGACAGCTTGTCAGCAGCGTTCCGTAATCTGAGTAAAGATGAGCGCGAGGATATTACCAAGCGTTATGCGGCCT
TCACACAGCATTATAGCATGGAGGCAAGTCGTAATAATCGCGGTGAGGCCCATGAGAATGGCGCGGTTGAATCCCAGAAT
AGGCACCTGAAAGTTGCTATTGAGCAGGCGCTTATTTTACGGGGCAGCCGCGACTTTGAAACGGTTGGTGAGTATCGCTG
TTTTGTAGACGAGTTGGTCGCACGCCGAAACAAGCATCGCGTTGATGCGCTTGCGACTGAACTGAAACATCTTCAGCCTT
TACCTGCAGGGCGCACGACTGACTTTACAGAGATTGTTGTGCAGGTTGTGCGCACCGGTGGGTTCTTGGTGAAGCAGATC
TTCTACAGCGCACCTTCTCGCCTCATAGGGCAGCGGTTGCGTGTGCATATCTATGATAACCGTATTGAGGCATATCTGGG
CAGCAGCCATGTGGTCAGCCACCCACGTGCGCGTGGACAGAAAAGCGGCGACCGCGTGCATGTGATTAATTACCACCACG
TGATCCATGCGTTGAAGCGTAAACCTGGGGCGTTGGCGAATTCGATCTACCGCGACAGCCTGTTTCCCAGAACGGAGTAC
GTTTTGGTCTGGAAGGCGTTGCAAGCTACACTATCGCGCCGTGATGCATGCCGTCGGATGGTGGACATCCTGTTTCTGGC
CCACGAGGAAAACGCTGAGATTGAGTTGGCAAGCCTGATGGCCGATGACCTGCACCAGGGTCGATTATCAGACGCGCGGG
ATCTCAAGGCGTTGCTCGTCCCTCGAGACCACAGCTTACCCAAAGATGTAGTCGTGAACTTGCCTGCACTGTCGTGCTTT
GACACGCTGTTGGAGGAGGCTGGATGA

Protein sequence :
MTDRNTHSQHTAAARAGFSERTARRFDADSTLPSQRQPKRVRTVADPLDGVWETLLLPILKQDSSVQAITLLRHLQQQCP
EDFQDDRIRRTLERRVRDWRALHGPERDIIFRQVPEPGYMCQSDFTNADGLGITVGENAFKHRLYHFVLVYSRWEHVGVV
LGGESYTALAENLQNALWALGGAPKNCRTDSLSAAFRNLSKDEREDITKRYAAFTQHYSMEASRNNRGEAHENGAVESQN
RHLKVAIEQALILRGSRDFETVGEYRCFVDELVARRNKHRVDALATELKHLQPLPAGRTTDFTEIVVQVVRTGGFLVKQI
FYSAPSRLIGQRLRVHIYDNRIEAYLGSSHVVSHPRARGQKSGDRVHVINYHHVIHALKRKPGALANSIYRDSLFPRTEY
VLVWKALQATLSRRDACRRMVDILFLAHEENAEIELASLMADDLHQGRLSDARDLKALLVPRDHSLPKDVVVNLPALSCF
DTLLEEAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 6e-87 42
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 4e-87 42
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 4e-87 42
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 7e-87 42
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-87 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OA238_c32760 YP_007700719.1 putative integrase VFG1728 Protein 3e-87 42