Gene Information

Name : OA238_c29970 (OA238_c29970)
Accession : YP_007700466.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : IS66-like transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3181485 - 3183185 bp
Length : 1701 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTCAGATCCCTCCAAATCTGGCTAATCTGCCCCCTGAAGTGCAGGCGCTGTTCGCCGCGCAGACCGCAGAATTGGA
CCGTAAGGATGCAGAAATGTTGGGCCAATCGCTGAGCCATGCGGCTGCACAAAAGCGCCTCAAGGCTGAGATGGCGTCAG
TGGACGCCGCTCTGAGTGCCGAGCGCTCCGCTCATGCGCGTGCCATCCAGAACCGAGACACCATCATCGCCGATCTGCGC
CTGCAACTTCACGGTCACAAAAAACACCGTTTTGGCTCAAAGTCAGAAAGCAGCGCACAACTGACGCTGGAGTTGATCCT
TGAAGAGATGGAAATCGAACAAGCCGCTGAGACGGATGATGAGGATGCGTCCTCTGACGCAGAAGCCAAGCCGCCCCGCA
CGCCGCGCAAGCGCAAACCCTTTCCGAAAAACCTCAAGCGGGTTCAGACGACCATCACCCCCAGTGACGCTTGCACCGAT
TGCGGCGGCAGCTTCAAAGTGCTTGGAACGGATGTGATGGAAGAATTGGAATATGTCCCGGGCCATTACATCGTGAACCA
AATAGGCCGCCCGCGTCTGGCTTGCACCTGTTGTGAGAAGGTCGTCCAGGCCGAGATGCCAAGCCGCCCCATTCCAAAGA
GCTTTGTGGGGCCCGCGCTGATGGCCCACATCTTGTGCTGCAAATACGGCTATCACCTGCCGCTGTATCGCCAGAGTCAG
ATGTTTGCCAATGAAGGCATAGATCTGAGTGGTTCGCTCATGGCGGGTTGGGTCGGTAAATGCACCAAACTGCTGGAGCG
CGTCTCAGATGCAATCCGCGATCACGTCTTTGAGGCGCAGGCCATCTTCATGGATGATACCACGGTCAAGCTGCTCCAGA
AGGGCAAGGGTCGTGGCAAGAATAAGACCAAAACGGCGCGACTGTGGGTCTATGCCCGAAAAGAAAATACTTGGGCCAGC
GGAGTACCACCTGCGGTGTGGTACCAATTCTCCACCAGTCGAGGGGCTGAACATCCCAGTCAGCATCTGGCTACCTATGA
AGGCTTTGCCCATGCGGACGCCTATGCTGGGTATAATGACGCGTACCGAACGGGACGCATCAAAGAGATGGCCTGTATCG
CGCATGTGCGACGTGAGATCTTTGATCTTTATGAAAGCACAAAGCTGCCTGTAGCTGGCGAAGCTGTGCTGCGGATTAAA
AAGCTCTATGATGTTGAGACACAAGCGCGGTTCCTGCCAGCATCTGAACGCGTGGCCCTGCGTCAGGAATACGCCAAACC
GATCTTTGACGACCTAGAGGTCTGGCTTAAAGAGCAACTGGGTAAAATCTCCAGCAAGACGCCGCTGGCCAAGGCGATCA
AATATGCGCTTGCCCGCCTGCCCAAGGCACGTCCCTATCTCGATCACGGCTTTCTTGAGTTGGACAACAACACAGCTGAG
AACGCAGTGCACCCTGTGGCCGTTGGCCGTAAAAACTATCTCTTCATGGGATCAGAAGCAGGCGGTAAATCTGCCGCCAT
CGCCTATACCCTCATTGAGACAGCCAAGATGAACAAGGTAAATCCCGAAGCCTGGCTTGCTTGGGTGCTGGAACGCATCC
AGGACCATCCAGCAAACCGTATAAACGATCTCATGCCGTGGGCCTATCAGGACATGATCAACGCTAAAACCGCCGAGGCC
GAGGCAAAAGGCGCTGCTTGA

Protein sequence : 
MSQIPPNLANLPPEVQALFAAQTAELDRKDAEMLGQSLSHAAAQKRLKAEMASVDAALSAERSAHARAIQNRDTIIADLR
LQLHGHKKHRFGSKSESSAQLTLELILEEMEIEQAAETDDEDASSDAEAKPPRTPRKRKPFPKNLKRVQTTITPSDACTD
CGGSFKVLGTDVMEELEYVPGHYIVNQIGRPRLACTCCEKVVQAEMPSRPIPKSFVGPALMAHILCCKYGYHLPLYRQSQ
MFANEGIDLSGSLMAGWVGKCTKLLERVSDAIRDHVFEAQAIFMDDTTVKLLQKGKGRGKNKTKTARLWVYARKENTWAS
GVPPAVWYQFSTSRGAEHPSQHLATYEGFAHADAYAGYNDAYRTGRIKEMACIAHVRREIFDLYESTKLPVAGEAVLRIK
KLYDVETQARFLPASERVALRQEYAKPIFDDLEVWLKEQLGKISSKTPLAKAIKYALARLPKARPYLDHGFLELDNNTAE
NAVHPVAVGRKNYLFMGSEAGGKSAAIAYTLIETAKMNKVNPEAWLAWVLERIQDHPANRINDLMPWAYQDMINAKTAEA
EAKGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 3e-87 46
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-79 43
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 4e-80 43
unnamed AAL57570.1 unknown Not tested LEE Protein 1e-80 43
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 1e-76 42
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 4e-80 41
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 1e-79 41
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 1e-79 41
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-80 41
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 6e-80 41
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-80 41
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 2e-80 41
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 2e-80 41
tnp AEA34686.1 transposase Not tested Not named Protein 3e-81 41
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 6e-76 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OA238_c29970 YP_007700466.1 IS66-like transposase VFG0793 Protein 8e-81 41