Gene Information

Name : OA238_c29960 (OA238_c29960)
Accession : YP_007700465.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : transposon-associated protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3181068 - 3181415 bp
Length : 348 bp
Strand : +
Note : IS66 orf2-like

DNA sequence :
ATGATCCCTGTGCTGGGGGATGCAAAAATCTGGCTTGCGGCAGGTGTCACGGATATGCGGCGCGGGTTCAACGGGCTGGC
TGCGCAAACAGAGCAAGTTCTGGCGGGTGATCCTTACGCGGGGCATCTGTTTTTGTTCCGAGGTCGTCGTGGGGATCAGA
TCAAGATGATCTGGTGGGATGGTCAGGGCGCATGCCTCTTCACCAAACGCCTTGAGCGAGGTCGGTTTGTGTGGCCCTCA
GCGCGCGAGGGCAAGATCAAACTGAGCCACGCGCAGTTGGCGATGCTGATGGAGGGGATTGATTGGCGCATTCTTAAGAA
AACATGGCGACCTTCAATGATTGGATAG

Protein sequence :
MIPVLGDAKIWLAAGVTDMRRGFNGLAAQTEQVLAGDPYAGHLFLFRGRRGDQIKMIWWDGQGACLFTKRLERGRFVWPS
AREGKIKLSHAQLAMLMEGIDWRILKKTWRPSMIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 7e-32 64
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-31 64
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-31 64
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 9e-32 64
unnamed AAC31493.1 L0014 Not tested LEE Protein 7e-32 64
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 9e-32 64
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 7e-32 64
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 9e-32 64
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 7e-31 64
unnamed AAL99258.1 unknown Not tested LEE Protein 7e-32 64
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 9e-32 64
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 7e-31 64
unnamed AAL08461.1 unknown Not tested SRL Protein 1e-31 63
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 2e-34 62
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-34 62
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 2e-24 61
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 4e-34 61
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 1e-26 56
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 3e-30 55
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 3e-30 55
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 3e-32 54
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 3e-32 54
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 3e-32 54
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 2e-31 52
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 2e-31 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OA238_c29960 YP_007700465.1 transposon-associated protein VFG1709 Protein 3e-32 64
OA238_c29960 YP_007700465.1 transposon-associated protein VFG1698 Protein 5e-32 64
OA238_c29960 YP_007700465.1 transposon-associated protein VFG0792 Protein 3e-32 64
OA238_c29960 YP_007700465.1 transposon-associated protein VFG1052 Protein 5e-32 63
OA238_c29960 YP_007700465.1 transposon-associated protein VFG1517 Protein 6e-25 61
OA238_c29960 YP_007700465.1 transposon-associated protein VFG1665 Protein 2e-34 61
OA238_c29960 YP_007700465.1 transposon-associated protein VFG1737 Protein 8e-33 54