Gene Information

Name : ribD (OA238_c27640)
Accession : YP_007700256.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.4.26
Position : 2942953 - 2944032 bp
Length : 1080 bp
Strand : -
Note : -

DNA sequence :
ATGGGCATGGCCCTGTCGCTTGGGCGGCGGGGCCTTGGTCGTGTTTGGCCCAATCCAAATGTCGGCTGTGTCATTGTGCG
CCCGTGCGAAAATGGTGGTCGCGTGATCGGACGCGGTTGGACGGCGGATGGTGGGCGGCCCCATGCGGAAACGCGCGCGC
TTGATAGTATCGATGCGGCAGGTGCCACTGCGTATGTGACGCTTGAACCGTGCGCCCATCATGCAAAAACGCCGCCCTGT
GTGGACGCGTTAATTGCTGCAAACGTGAGCCGCGTTGTGATTGCAACAGGCGACCCTGACCCGCGCGTGGCGGGCAAGGG
GATTGCGATTTTGCGAGCGGCCGGGATCGACGTCATGATTGGTGTGCGCGAGGATGAAGCCCGCGTGGATATGGCGGGTT
TTCTGCTGCGTATTACCGAAAACCGCCCCCTCGTGACGCTAAAACTTGCCAGTTCATTCGATGGGCGCATTGCGGCTGCC
ACTGGTGAAAGCAAATGGATCACCGGCCCGGACGCGCGCCGCAAGGTCCACGCGATGCGCGCGGCGCACGATGCAGTTTT
GGTTGGGGCGGGTACAGTGCGCGCGGATGATCCAACATTGACGGTGCGCGAAATGGGCGCGGTGCGCCAGCCTGTGCGCA
TCGTGGCGTCTGGGCGGCTTGATATGGGTGCTGCAAACCTGTTGGCGACGATTAACTATGCCCCGTTGTGGCTGTGTCAT
GGGGCGAATGTTGATGCGCAGAAATGGGTTGATCAAGGGGCCAAATCCTTGCCGTGCGATTTGCAGGGCAGGGAGATTGA
TCCCGTTGATATGATGCATAAATTGGCGGCTGCGGGGCTGACGCGGGTGTTTTGTGAAGGTGGGGGCAGCCTTGCCGCGT
CCCTGCTTGGTGCGGGTCTGGTGGATGAGATCGTCGGCTTTACGGCGGGCATCGTGCTGGGGGCGGAGGGCACGCCGTCG
ATTGGGGCGATGGGGCTGGATCGATTGGCCGACGCGCCGCGATTTGATCTGGTTGAAACCACGCGCATTGGTGCAGATAT
TATGCACCGCTGGCGTCGCGCCTTATTGTACGCGACTTAA

Protein sequence :
MGMALSLGRRGLGRVWPNPNVGCVIVRPCENGGRVIGRGWTADGGRPHAETRALDSIDAAGATAYVTLEPCAHHAKTPPC
VDALIAANVSRVVIATGDPDPRVAGKGIAILRAAGIDVMIGVREDEARVDMAGFLLRITENRPLVTLKLASSFDGRIAAA
TGESKWITGPDARRKVHAMRAAHDAVLVGAGTVRADDPTLTVREMGAVRQPVRIVASGRLDMGAANLLATINYAPLWLCH
GANVDAQKWVDQGAKSLPCDLQGREIDPVDMMHKLAAAGLTRVFCEGGGSLAASLLGAGLVDEIVGFTAGIVLGAEGTPS
IGAMGLDRLADAPRFDLVETTRIGADIMHRWRRALLYAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-39 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-39 41