Gene Information

Name : OA238_c26700 (OA238_c26700)
Accession : YP_007700167.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : glycine betaine/proline ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2842256 - 2843275 bp
Length : 1020 bp
Strand : -
Note : -

DNA sequence :
ATGTCAGCTGATACGCCCGTCATTTCTTGTCGCAACGCTTGGAAAATATTTGGGCCAGATCCGGCGGCCTTTCATAAGAA
AATGACCCCTGACATGAGTTTTGATGACATCCGCGAGGCGGGCTATATCGCCGGCGTCCGCGATGTCTCGCTCGATGTCC
AAAAGGGTGAGATGTTGGTTATTATGGGCTTGTCGGGGTCTGGGAAATCCACTTTGGTCCGTTGTTTTTCGCGCCTTCAT
GATATCACCAGCGGGACGATTACTGTCGAAGGGCAGGACATCATGTCATTGCCCGAAAAAGAACTGATTGATTTACGTCG
CTCCAAAATGGGCATGGTGTTCCAATCGTTTGGTCTGCTGCCGCACCGTTCCGTTCTGGATAACGTTGCCTTCCCGTTGG
AAATGCGTGGACAAGATAAACACACACGGCGTGAGCGTGCGCTTGAGGTGATCAAACTGGTGGGCCTTGAGGGGCGTGAG
GATTATTTTCCGCGCGAATTGTCCGGCGGCCAACAGCAGCGCGTCGGCATTGCACGTTCGCTTGCGATTGAACCCGATAT
TTGGTTTCTGGATGAACCGTTCAGCGCGCTGGACCCGTTGATCCGCAAAGAAATGCAGGATGAATTTCTGCGCCTGCAAC
AGCTGCTCAACAAAACTATTGTCTTTATCACGCACGACTTCGACGAGGCCCTGCGCCTTGCCGATCGCATTGCCATCATG
AAAGACGGCGCGATTGAGCAATGCGATACACCTGACCAAATCGTGTTGCATCCTGCCACAGAATACGTGCGCAAATTTAC
TGAAGACATCGACAAAGCCCGCGTCGTGCATGCTGGCGTTCTGGCCATCGCTGACACGCACGGGGAGGGTGATCCGGTTG
ATGCCAAAGCCACGATCAAAGACCTCGCCAAGCTGTTGGTTCATGATACGCGCGACGTTATCCCTGTTCACAAAAACGGC
TTGGTCATCGGTGGCATGAACCGTCAAGACGGACTAACGGTTCTGCTGGAGGCCAATTAA

Protein sequence :
MSADTPVISCRNAWKIFGPDPAAFHKKMTPDMSFDDIREAGYIAGVRDVSLDVQKGEMLVIMGLSGSGKSTLVRCFSRLH
DITSGTITVEGQDIMSLPEKELIDLRRSKMGMVFQSFGLLPHRSVLDNVAFPLEMRGQDKHTRRERALEVIKLVGLEGRE
DYFPRELSGGQQQRVGIARSLAIEPDIWFLDEPFSALDPLIRKEMQDEFLRLQQLLNKTIVFITHDFDEALRLADRIAIM
KDGAIEQCDTPDQIVLHPATEYVRKFTEDIDKARVVHAGVLAIADTHGEGDPVDAKATIKDLAKLLVHDTRDVIPVHKNG
LVIGGMNRQDGLTVLLEAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 8e-38 43
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 8e-38 43